Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EA665_RS09115 | Genome accession | NZ_CP039343 |
| Coordinates | 1891397..1891777 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain TG31302 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1886397..1896777
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EA665_RS09085 (EA665_009085) | kdsB | 1887300..1888061 (+) | 762 | WP_000680694.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| EA665_RS09090 (EA665_009090) | - | 1888073..1889053 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| EA665_RS09095 (EA665_009095) | - | 1889065..1889406 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EA665_RS09100 (EA665_009100) | - | 1889424..1890197 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EA665_RS09105 (EA665_009105) | - | 1890235..1890843 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EA665_RS09110 (EA665_009110) | - | 1890853..1891407 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EA665_RS09115 (EA665_009115) | xcpV | 1891397..1891777 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EA665_RS09120 (EA665_009120) | xcpW | 1891777..1892478 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EA665_RS09125 (EA665_009125) | gspK | 1892478..1893437 (+) | 960 | WP_000301463.1 | type II secretion system minor pseudopilin GspK | - |
| EA665_RS09130 (EA665_009130) | - | 1893667..1894263 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EA665_RS09135 (EA665_009135) | ung | 1894314..1895027 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EA665_RS09140 (EA665_009140) | - | 1895024..1896148 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EA665_RS09145 (EA665_009145) | tadA | 1896155..1896658 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=358193 EA665_RS09115 WP_000836911.1 1891397..1891777(+) (xcpV) [Acinetobacter baumannii strain TG31302]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=358193 EA665_RS09115 WP_000836911.1 1891397..1891777(+) (xcpV) [Acinetobacter baumannii strain TG31302]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |