Detailed information NTG0358194

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EA665_RS09120
• Genome accession: NZ_CP039343
• Coordinates: 1891777..1892478 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain TG31302
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1886777..1897478

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EA665_RS09085 (EA665_009085)	kdsB	1887300..1888061 (+)	762	WP_000680694.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EA665_RS09090 (EA665_009090)	-	1888073..1889053 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
EA665_RS09095 (EA665_009095)	-	1889065..1889406 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
EA665_RS09100 (EA665_009100)	-	1889424..1890197 (+)	774	WP_000497298.1	TatD family hydrolase	-
EA665_RS09105 (EA665_009105)	-	1890235..1890843 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EA665_RS09110 (EA665_009110)	-	1890853..1891407 (+)	555	WP_000841373.1	type II secretion system protein	-
EA665_RS09115 (EA665_009115)	xcpV	1891397..1891777 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EA665_RS09120 (EA665_009120)	xcpW	1891777..1892478 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EA665_RS09125 (EA665_009125)	gspK	1892478..1893437 (+)	960	WP_000301463.1	type II secretion system minor pseudopilin GspK	-
EA665_RS09130 (EA665_009130)	-	1893667..1894263 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
EA665_RS09135 (EA665_009135)	ung	1894314..1895027 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
EA665_RS09140 (EA665_009140)	-	1895024..1896148 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EA665_RS09145 (EA665_009145)	tadA	1896155..1896658 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
EA665_RS09150 (EA665_009150)	-	1896728..1897171 (+)	444	WP_001246676.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=358194 EA665_RS09120 WP_000594572.1 1891777..1892478(+) (xcpW) [Acinetobacter baumannii strain TG31302]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=358194 EA665_RS09120 WP_000594572.1 1891777..1892478(+) (xcpW) [Acinetobacter baumannii strain TG31302]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GGTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991