Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EA743_RS09145 | Genome accession | NZ_CP039341 |
| Coordinates | 1893262..1893642 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain TG31986 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1888262..1898642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EA743_RS09115 (EA743_009115) | kdsB | 1889165..1889926 (+) | 762 | WP_000680694.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| EA743_RS09120 (EA743_009120) | - | 1889938..1890918 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| EA743_RS09125 (EA743_009125) | - | 1890930..1891271 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EA743_RS09130 (EA743_009130) | - | 1891289..1892062 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EA743_RS09135 (EA743_009135) | - | 1892100..1892708 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EA743_RS09140 (EA743_009140) | - | 1892718..1893272 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EA743_RS09145 (EA743_009145) | xcpV | 1893262..1893642 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EA743_RS09150 (EA743_009150) | xcpW | 1893642..1894343 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EA743_RS09155 (EA743_009155) | gspK | 1894343..1895302 (+) | 960 | WP_000301463.1 | type II secretion system minor pseudopilin GspK | - |
| EA743_RS09160 (EA743_009160) | - | 1895532..1896128 (+) | 597 | WP_000908453.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EA743_RS09165 (EA743_009165) | ung | 1896179..1896892 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EA743_RS09170 (EA743_009170) | - | 1896889..1898013 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EA743_RS09175 (EA743_009175) | tadA | 1898020..1898523 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=358146 EA743_RS09145 WP_000836911.1 1893262..1893642(+) (xcpV) [Acinetobacter baumannii strain TG31986]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=358146 EA743_RS09145 WP_000836911.1 1893262..1893642(+) (xcpV) [Acinetobacter baumannii strain TG31986]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |