Detailed information NTG0358147

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: EA743_RS09150
• Genome accession: NZ_CP039341
• Coordinates: 1893642..1894343 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain TG31986
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1888642..1899343

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EA743_RS09115 (EA743_009115)	kdsB	1889165..1889926 (+)	762	WP_000680694.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EA743_RS09120 (EA743_009120)	-	1889938..1890918 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
EA743_RS09125 (EA743_009125)	-	1890930..1891271 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
EA743_RS09130 (EA743_009130)	-	1891289..1892062 (+)	774	WP_000497298.1	TatD family hydrolase	-
EA743_RS09135 (EA743_009135)	-	1892100..1892708 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
EA743_RS09140 (EA743_009140)	-	1892718..1893272 (+)	555	WP_000841373.1	type II secretion system protein	-
EA743_RS09145 (EA743_009145)	xcpV	1893262..1893642 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
EA743_RS09150 (EA743_009150)	xcpW	1893642..1894343 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
EA743_RS09155 (EA743_009155)	gspK	1894343..1895302 (+)	960	WP_000301463.1	type II secretion system minor pseudopilin GspK	-
EA743_RS09160 (EA743_009160)	-	1895532..1896128 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
EA743_RS09165 (EA743_009165)	ung	1896179..1896892 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
EA743_RS09170 (EA743_009170)	-	1896889..1898013 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
EA743_RS09175 (EA743_009175)	tadA	1898020..1898523 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
EA743_RS09180 (EA743_009180)	-	1898593..1899036 (+)	444	WP_001246676.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=358147 EA743_RS09150 WP_000594572.1 1893642..1894343(+) (xcpW) [Acinetobacter baumannii strain TG31986]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=358147 EA743_RS09150 WP_000594572.1 1893642..1894343(+) (xcpW) [Acinetobacter baumannii strain TG31986]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCCAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATAGATAA
TCAAATTCTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GGTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991