Detailed information NTG0357986

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: E4T61_RS01995
• Genome accession: NZ_CP039297
• Coordinates: 401737..402885 (+)
• Length: 382 a.a.
• NCBI ID: WP_007410270.1
• Uniprot ID: -
• Organism: Bacillus velezensis isolate UFLA258
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 396737..407885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E4T61_RS01975 (E4T61_01975)	-	397135..397818 (-)	684	WP_076425712.1	ABC transporter ATP-binding protein	-
E4T61_RS01980 (E4T61_01980)	-	397833..399268 (-)	1436	Protein_354	ABC transporter permease	-
E4T61_RS01985 (E4T61_01985)	-	399481..400164 (+)	684	WP_007410267.1	response regulator transcription factor	-
E4T61_RS01990 (E4T61_01990)	-	400151..401584 (+)	1434	WP_162992601.1	HAMP domain-containing sensor histidine kinase	-
E4T61_RS01995 (E4T61_01995)	rapC	401737..402885 (+)	1149	WP_007410270.1	Rap family tetratricopeptide repeat protein	Regulator
E4T61_RS02000 (E4T61_02000)	phrC	402869..402988 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
E4T61_RS02005 (E4T61_02005)	-	403137..403232 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
E4T61_RS02010 (E4T61_02010)	-	403327..404691 (-)	1365	WP_136396097.1	aspartate kinase	-
E4T61_RS02015 (E4T61_02015)	ceuB	405105..406058 (+)	954	WP_059366593.1	ABC transporter permease	Machinery gene
E4T61_RS02020 (E4T61_02020)	-	406048..406995 (+)	948	WP_007410274.1	iron chelate uptake ABC transporter family permease subunit	-
E4T61_RS02025 (E4T61_02025)	-	406989..407747 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45475.70 Da
• Isoelectric Point: 4.9916

>NTDB_id=357986 E4T61_RS01995 WP_007410270.1 401737..402885(+) (rapC) [Bacillus velezensis isolate UFLA258]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=357986 E4T61_RS01995 WP_007410270.1 401737..402885(+) (rapC) [Bacillus velezensis isolate UFLA258]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGATTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTCGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAAATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568