Detailed information    

insolico Bioinformatically predicted

Overview

Name   comD/blpH   Type   Regulator
Locus tag   GQY29_RS10715 Genome accession   NZ_CP047191
Coordinates   919566..920369 (-) Length   267 a.a.
NCBI ID   WP_223899638.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain EU01     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 914566..925369
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQY29_RS04930 (GQY29_04930) comA/nlmT 915836..917989 (+) 2154 WP_041827378.1 peptide cleavage/export ABC transporter Regulator
  GQY29_RS04935 (GQY29_04935) comB 918005..919372 (+) 1368 WP_011681574.1 bacteriocin secretion accessory protein Regulator
  GQY29_RS04940 (GQY29_04940) - 919387..919548 (+) 162 WP_011681573.1 ComC/BlpC family leader-containing pheromone/bacteriocin -
  GQY29_RS10715 comD/blpH 919566..920369 (-) 804 WP_223899638.1 ATP-binding protein Regulator
  GQY29_RS04950 (GQY29_04950) - 920900..921637 (-) 738 WP_011681571.1 response regulator transcription factor -
  GQY29_RS04955 (GQY29_04955) - 921887..922063 (+) 177 WP_011681570.1 Blp family class II bacteriocin -
  GQY29_RS04960 (GQY29_04960) - 922082..922282 (+) 201 WP_011681569.1 hypothetical protein -
  GQY29_RS04965 (GQY29_04965) - 922639..922869 (+) 231 WP_014608662.1 bacteriocin class II family protein -
  GQY29_RS10345 - 922876..923019 (+) 144 WP_014608661.1 hypothetical protein -
  GQY29_RS11115 (GQY29_04975) - 923874..924275 (+) 402 WP_011226490.1 hypothetical protein -
  GQY29_RS04980 (GQY29_04980) cipB 924526..924765 (+) 240 WP_011681565.1 Blp family class II bacteriocin Regulator
  GQY29_RS04985 (GQY29_04985) - 924777..925169 (+) 393 WP_003094909.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 30641.92 Da        Isoelectric Point: 4.7379

>NTDB_id=357954 GQY29_RS10715 WP_223899638.1 919566..920369(-) (comD/blpH) [Streptococcus thermophilus strain EU01]
MYLENTTHSSTLELRKLCVVISLVLFFIMIVFLDRNIREMIQGQLDFQKNLQLENLYTYNKHIEGLYNSVRSFRHDYSNL
LVTLRLGIDKDDMDIVKEAYDSVLQESDKRLNTRNFDLARLVNIQDNTLKSLLSAKVLQAEEEGIEAQISIPEPIHLIGM
ETLDFIIVTSIFLDNAIEGAIQTQNPKITISFWEDHCSQLLSISNTISEEKTETKTIFERGVSNKGRERGIGLANVTEIL
DNYINVNLETQSNNFSFTQQLTITKKA

Nucleotide


Download         Length: 804 bp        

>NTDB_id=357954 GQY29_RS10715 WP_223899638.1 919566..920369(-) (comD/blpH) [Streptococcus thermophilus strain EU01]
ATGTATCTTGAAAACACTACTCATTCTTCAACTTTGGAGCTTCGAAAACTCTGTGTTGTTATTTCACTTGTCCTCTTCTT
CATTATGATTGTCTTTTTAGACAGAAACATTCGTGAAATGATTCAAGGACAATTGGACTTCCAAAAAAATCTCCAGCTAG
AAAATCTCTACACCTACAATAAACATATTGAAGGTCTCTACAATTCTGTTCGTAGTTTTAGACACGATTATAGTAATCTC
TTAGTCACATTACGATTGGGGATAGATAAAGACGATATGGATATTGTCAAAGAAGCCTATGATAGTGTGCTTCAAGAATC
CGATAAACGATTAAATACAAGAAACTTTGACTTAGCTAGACTCGTTAATATTCAGGATAACACTTTGAAAAGCCTTCTGT
CCGCAAAAGTTCTACAAGCAGAAGAAGAAGGCATTGAAGCTCAGATTAGCATCCCAGAACCCATCCACTTGATTGGGATG
GAGACTCTGGACTTCATTATCGTCACTTCTATTTTTTTAGATAACGCTATTGAAGGTGCCATTCAAACTCAAAACCCTAA
AATTACTATTAGCTTTTGGGAAGATCATTGTTCACAGCTATTATCTATTAGCAATACCATAAGTGAAGAAAAAACAGAAA
CCAAAACCATATTTGAAAGAGGTGTCTCCAACAAGGGACGAGAGCGAGGCATTGGCCTTGCTAATGTCACAGAAATCTTA
GATAACTATATCAATGTAAACTTAGAAACACAGAGTAACAATTTCTCATTCACACAACAATTAACAATAACTAAAAAGGC
CTAA

Domains

Predicted by InterProScan.

GHKL domain (HATPase_c_5)

(160-263)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

38.189

95.131

0.363

Multiple sequence alignment