Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   GR131_RS12750 Genome accession   NZ_CP047147
Coordinates   2993722..2994843 (+) Length   373 a.a.
NCBI ID   WP_030770839.1    Uniprot ID   A0ABY3GYB8
Organism   Streptomyces sp. GF20     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2988722..2999843
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR131_RS12730 (GR131_12730) - 2989148..2989369 (-) 222 WP_003948872.1 hypothetical protein -
  GR131_RS12735 (GR131_12735) - 2989483..2991225 (-) 1743 WP_010645242.1 sigma factor-like helix-turn-helix DNA-binding protein -
  GR131_RS12740 (GR131_12740) - 2991504..2992079 (+) 576 WP_003948874.1 dihydrofolate reductase family protein -
  GR131_RS12745 (GR131_12745) radA/sms 2992133..2993551 (+) 1419 WP_003948876.1 DNA repair protein RadA Machinery gene
  GR131_RS12750 (GR131_12750) disA 2993722..2994843 (+) 1122 WP_030770839.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  GR131_RS12755 (GR131_12755) - 2994927..2995745 (-) 819 WP_236570758.1 hypothetical protein -
  GR131_RS12760 (GR131_12760) - 2996101..2996850 (+) 750 WP_008404973.1 phosphatase PAP2 family protein -
  GR131_RS12765 (GR131_12765) - 2996963..2998015 (+) 1053 WP_008404974.1 A/G-specific adenine glycosylase -
  GR131_RS12770 (GR131_12770) - 2998234..2998773 (+) 540 WP_003948881.1 SigE family RNA polymerase sigma factor -
  GR131_RS12775 (GR131_12775) - 2998794..2999462 (+) 669 WP_018895477.1 hypothetical protein -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 40273.14 Da        Isoelectric Point: 5.1034

>NTDB_id=357746 GR131_RS12750 WP_030770839.1 2993722..2994843(+) (disA) [Streptomyces sp. GF20]
MAANDRATAPGKSGGPGADGLMRASLSAVAPGTQLRDGLERILRGNTGGLIVLGWDRTVESMCTGGFVLDVEFSATRLRE
LCKLDGGIVLDKDLTKILRAGVQLVPDPTIPTDETGTRHRTADRVSKQVNFPVVSVSQSMRLIALYVDGQRRVLEDSAAI
LSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVSQRLEMVRRIAAEIAEYVVELGTDGRLLALQLDELIAG
VEPERELVVRDYVPEPTAKRSRTVDEALTELGKLSHTELLELPVVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGAI
IDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=357746 GR131_RS12750 WP_030770839.1 2993722..2994843(+) (disA) [Streptomyces sp. GF20]
GTGGCAGCCAATGACCGGGCAACGGCCCCCGGCAAGTCCGGCGGGCCCGGTGCCGACGGGCTGATGCGTGCCTCGCTGAG
CGCCGTCGCCCCCGGCACCCAGCTGCGGGACGGGCTGGAGCGGATTCTGCGGGGGAACACCGGCGGACTCATCGTGCTCG
GCTGGGACAGGACCGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCTCCGCGACCCGCCTGCGCGAG
CTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACCTCACCAAGATCCTGCGCGCCGGAGTCCAGCTCGTCCCCGA
CCCGACCATCCCCACCGACGAGACCGGCACCCGGCACCGCACCGCCGACCGCGTCTCCAAGCAGGTCAACTTCCCCGTGG
TCTCGGTCAGCCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGCAGCGCCGGGTCCTGGAGGACTCGGCCGCCATC
CTCTCCCGCGCCAACCAGGCCCTCGCGACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCCGGCACGCTCTCGGC
GCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCCGTCTCGCAGCGGCTGGAGATGGTCCGCCGGATCGCCG
CCGAGATCGCCGAGTACGTGGTGGAACTGGGCACCGACGGGCGTCTGCTCGCCCTCCAGCTGGACGAGCTGATCGCCGGC
GTCGAGCCCGAACGCGAGCTGGTCGTCCGGGACTACGTGCCGGAACCCACGGCGAAGCGTTCCCGGACGGTGGACGAGGC
GCTGACGGAGCTGGGCAAACTCAGCCACACCGAGCTGCTCGAACTGCCCGTGGTGGCGCGGGCGCTCGGCTACACCGGCT
CGCCGGAGGCGCTGGACTCGGCGGTGTCGCCGCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGGCTGCCCGGGGCCATC
ATCGACCGGCTGGTGGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCGGCCAGTGTGGACGACCTGCAGACGGTGGACGG
CGTCGGCGAGGCCCGCGCCCGCAGCGTCCGCGAGGGCCTCTCCCGCCTGGCCGAGTCGTCGATCCTGGAGCGGTACGTCT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.532

92.761

0.432