Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GR131_RS07830 Genome accession   NZ_CP047147
Coordinates   1904017..1905933 (-) Length   638 a.a.
NCBI ID   WP_015507929.1    Uniprot ID   A0ABR4SBP3
Organism   Streptomyces sp. GF20     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1899017..1910933
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GR131_RS07810 (GR131_07810) - 1899136..1900398 (+) 1263 WP_003947900.1 FAD-dependent oxidoreductase -
  GR131_RS07815 (GR131_07815) dnaG 1900519..1902423 (+) 1905 WP_026234986.1 DNA primase -
  GR131_RS07820 (GR131_07820) rpoS 1902621..1903694 (+) 1074 WP_008405566.1 RNA polymerase sigma factor Regulator
  GR131_RS07825 (GR131_07825) - 1903711..1903926 (-) 216 WP_159312161.1 hypothetical protein -
  GR131_RS07830 (GR131_07830) rcrQ 1904017..1905933 (-) 1917 WP_015507929.1 ABC transporter ATP-binding protein Regulator
  GR131_RS07835 (GR131_07835) rcrP 1905933..1907666 (-) 1734 WP_015507928.1 ABC transporter ATP-binding protein Regulator
  GR131_RS07840 (GR131_07840) - 1907800..1909254 (-) 1455 WP_008405577.1 FGGY family carbohydrate kinase -
  GR131_RS07845 (GR131_07845) - 1909344..1909643 (-) 300 WP_003947907.1 hypothetical protein -
  GR131_RS07865 (GR131_07865) - 1910352..1910804 (-) 453 WP_003947908.1 hypothetical protein -

Sequence

Protein


Download         Length: 638 a.a.        Molecular weight: 68783.83 Da        Isoelectric Point: 4.8614

>NTDB_id=357737 GR131_RS07830 WP_015507929.1 1904017..1905933(-) (rcrQ) [Streptomyces sp. GF20]
MAGPMGAGAPGQQSMDFKGSGKRLLAQFRPEKKVLWAMLATGLVSVALSVTGPKILGWATDLVFAGIVGRDMPAGATREQ
VLAGMREGGDDGVADMLSGMDFTPGQGIDFGAVGEVLLLALGVFLLASALMAVSARLSNRAINRTVFRMRRDVQTKLSRL
PLSYFDQRQRGEVLSRATNDIDNIGQTLQQTMGQVVNSLLTVIGVLVMMFWISPLLALVALVTVPLSFVVATRVGKRSQP
HFVSQWSSTGTLNAHIEEMYTGHSLVKVFGRQDESAERFAEENDALYQASFKAQFTSGIMQPLMMFVSNFNYVLVAVVGG
LRVASGALSIGDVQAFIQYSRQFSMPLTQVASMANLVQSGVASAERVFELLDADEQEPDPVPGARLEKPLGRVALEKVSF
RYEPDRPLIEDLSLTVEPGRTVAIVGPTGAGKTTLVNLLMRFYEVTGGRITLDGVEIAAMAREDLRSRIGMVLQDTWLFG
GTIAENIAYGASREVSREEVEEAARAAHADRFVRTLPDGYDTVLDDEGSGVSAGEKQLVTIARAFLSDPVILVLDEATSS
VDTRTEVLIQQAMARLAHGRTSFVIAHRLSTIRDADTILVMENGAIVEQGSHTELLAAEGAYARLYAAQFAEAAVEVD

Nucleotide


Download         Length: 1917 bp        

>NTDB_id=357737 GR131_RS07830 WP_015507929.1 1904017..1905933(-) (rcrQ) [Streptomyces sp. GF20]
ATGGCGGGCCCGATGGGCGCGGGAGCGCCGGGACAGCAGTCGATGGACTTCAAGGGTTCGGGCAAGCGGCTGCTGGCCCA
GTTCCGCCCCGAGAAGAAGGTGCTGTGGGCGATGCTCGCCACCGGCCTGGTCAGCGTGGCGCTCTCGGTGACCGGCCCGA
AGATCCTCGGCTGGGCCACCGACCTGGTCTTCGCGGGCATCGTCGGCCGCGACATGCCGGCCGGCGCCACCCGCGAGCAG
GTGCTGGCGGGGATGCGCGAGGGCGGCGACGACGGCGTGGCCGACATGCTCTCCGGAATGGACTTCACCCCCGGCCAGGG
CATCGACTTCGGTGCCGTCGGCGAGGTGCTGCTGCTGGCCCTCGGCGTCTTCCTGCTGGCCAGCGCCCTGATGGCGGTCT
CGGCGCGGCTGAGCAACCGCGCGATCAACCGCACCGTCTTCCGGATGCGCCGCGACGTGCAGACCAAGCTGTCGCGGCTC
CCGCTCTCCTACTTCGACCAGCGCCAGCGCGGCGAGGTGCTCAGCCGCGCCACCAACGACATCGACAACATCGGCCAGAC
GCTCCAGCAGACGATGGGCCAGGTGGTCAACTCGCTGCTGACCGTCATCGGTGTGCTGGTGATGATGTTCTGGATATCGC
CGCTGCTCGCCCTGGTGGCGCTGGTGACGGTGCCGCTCTCCTTCGTGGTCGCCACCCGGGTCGGCAAGCGCTCCCAGCCG
CACTTCGTCAGCCAGTGGTCCTCCACGGGCACGCTCAACGCCCACATCGAGGAGATGTACACCGGCCACAGCCTGGTCAA
GGTCTTCGGCCGCCAGGACGAGTCGGCCGAGCGGTTCGCCGAGGAGAACGACGCGCTCTACCAGGCGTCCTTCAAGGCCC
AGTTCACCAGCGGCATCATGCAGCCGCTGATGATGTTCGTCTCCAACTTCAACTACGTGCTGGTCGCCGTCGTCGGCGGC
CTCCGGGTCGCCTCGGGCGCCCTGTCCATCGGCGACGTGCAGGCGTTCATCCAGTACTCCCGGCAGTTCTCGATGCCGCT
GACCCAGGTCGCCTCGATGGCCAACCTGGTGCAGTCCGGCGTCGCCTCCGCCGAGCGGGTCTTCGAACTCCTCGACGCCG
ACGAGCAGGAGCCCGACCCGGTCCCCGGCGCCCGCCTGGAGAAGCCGCTGGGCCGCGTCGCCCTGGAGAAGGTCTCCTTC
CGCTACGAGCCGGACCGGCCCCTGATCGAGGACCTCTCCCTGACCGTCGAGCCGGGCCGCACGGTCGCCATCGTCGGCCC
GACCGGCGCCGGCAAGACCACCCTGGTCAACCTGCTGATGCGGTTCTACGAGGTCACCGGCGGCCGGATCACCCTGGACG
GCGTCGAGATCGCCGCCATGGCCCGGGAGGACCTGCGCTCCCGGATCGGCATGGTCCTCCAGGACACCTGGCTGTTCGGC
GGCACCATCGCGGAGAACATCGCCTACGGCGCCTCCCGCGAGGTCAGCCGCGAGGAGGTCGAGGAGGCGGCCCGCGCCGC
CCACGCCGACCGCTTCGTCCGCACGCTCCCCGACGGCTACGACACCGTCCTGGACGACGAGGGCAGCGGGGTCAGCGCAG
GGGAGAAGCAGCTCGTCACCATCGCGCGGGCCTTCCTCTCCGACCCGGTGATCCTCGTCCTGGACGAGGCCACCAGCTCG
GTGGACACCCGTACCGAGGTGCTGATCCAGCAGGCCATGGCCCGGCTCGCGCACGGCCGGACCTCCTTCGTCATCGCCCA
CCGCCTCTCCACGATCCGGGACGCCGACACGATCCTGGTGATGGAGAACGGGGCCATCGTCGAGCAGGGCTCGCACACCG
AACTCCTCGCCGCCGAGGGGGCGTACGCCCGCCTCTACGCGGCCCAGTTCGCCGAGGCGGCCGTCGAGGTCGACTGA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(111-347)

ABC transporter (ABC_tran)

(410-559)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

41.613

97.179

0.404

Multiple sequence alignment