Detailed information NTG0357170

Bioinformatically predicted

Overview

• Name: radA
• Type: Machinery gene
• Locus tag: E5259_RS17615
• Genome accession: NZ_CP039126
• Coordinates: 3867812..3869188 (-)
• Length: 458 a.a.
• NCBI ID: WP_018596707.1
• Uniprot ID: A0A7G5MXB4
• Organism: Blautia producta strain DSM 2950
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3862812..3874188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5259_RS17610 (E5259_17565)	-	3866699..3867625 (-)	927	WP_018596708.1	GNAT family N-acetyltransferase	-
E5259_RS17615 (E5259_17570)	radA	3867812..3869188 (-)	1377	WP_018596707.1	DNA repair protein RadA	Machinery gene
E5259_RS17620 (E5259_17575)	-	3869290..3869703 (-)	414	WP_018596706.1	hypothetical protein	-
E5259_RS17625 (E5259_17580)	-	3869827..3872289 (-)	2463	WP_018596705.1	ATP-dependent Clp protease ATP-binding subunit	-
E5259_RS17630 (E5259_17585)	-	3872350..3872718 (-)	369	WP_018596704.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 458 a.a.
• Molecular weight: 49405.01 Da
• Isoelectric Point: 6.8185

>NTDB_id=357170 E5259_RS17615 WP_018596707.1 3867812..3869188(-) (radA) [Blautia producta strain DSM 2950]
MAKAKKTVFFCQNCGYESAKWMGQCPGCREWNSFVEETVSQGTKKGPGQTAPGAAGGRAGKPMMLSEIDIREDNRIRTSM
DELDRVLGGGVVQGSMVLVGGDPGIGKSTLLLQVCKLLSDSGHKILYISGEESLQQIKMRAQRIGVFNENLRLLCETNLE
AISTTIENEKPEAVIIDSIQTMYNEEVSSAPGSVSQVRESTGILMKIAKGMGISVFIVGHVTKDGSVAGPRVLEHMVDTV
LYFEGDRHASYRILRSVKNRFGSTNEIGVFEMQECGLVEVKNPSQVMLNGRPTDASGTVVVCSLEGTRPILIEIQALVTK
TNFGLPRRTSVGIDYNRVNLLMAVLEKRAGLALGNCDAYVNLAGGMKLGEPAIDLGIVAAIISSYRNRTVDPDTLIFGEV
GLSGEVRGVSQAQQRVKEAEKMGFTTCIMPKANLEGLQGDFKIALIGVGNIKEVMGYI

Nucleotide

• Length: 1377 bp

>NTDB_id=357170 E5259_RS17615 WP_018596707.1 3867812..3869188(-) (radA) [Blautia producta strain DSM 2950]
ATGGCAAAGGCTAAAAAGACAGTTTTTTTCTGTCAGAACTGCGGATATGAATCCGCAAAATGGATGGGACAGTGTCCCGG
CTGCCGGGAGTGGAATTCATTTGTGGAGGAGACTGTTTCCCAGGGGACGAAAAAAGGCCCAGGGCAGACTGCCCCCGGTG
CAGCGGGCGGCCGTGCAGGTAAACCTATGATGCTCTCTGAGATAGATATCCGGGAGGACAACCGGATCAGGACCAGTATG
GACGAATTAGACCGGGTACTGGGCGGCGGTGTGGTGCAAGGCTCTATGGTACTGGTGGGAGGAGACCCTGGAATTGGAAA
ATCCACGCTTCTTCTGCAGGTATGTAAACTGCTTTCTGATTCAGGCCATAAAATCCTATATATATCAGGAGAAGAATCCC
TCCAACAGATAAAAATGCGGGCACAGCGTATCGGAGTATTCAATGAGAATTTGCGCCTTCTCTGTGAGACGAATCTGGAG
GCCATCAGCACAACAATAGAAAATGAGAAGCCGGAGGCAGTCATCATTGACTCGATCCAGACCATGTATAATGAGGAAGT
GTCCTCAGCACCGGGGAGCGTTTCCCAGGTCCGGGAATCCACCGGTATTTTGATGAAGATTGCAAAAGGAATGGGAATAT
CTGTATTCATTGTGGGACATGTGACAAAGGATGGAAGTGTGGCGGGACCCCGTGTATTGGAACATATGGTGGATACGGTA
CTGTATTTCGAGGGGGATAGACATGCGTCTTACAGGATCCTCAGGAGTGTGAAGAACCGTTTTGGCTCCACCAATGAAAT
CGGCGTATTTGAGATGCAGGAGTGCGGGCTTGTGGAGGTGAAAAACCCATCCCAGGTCATGCTGAACGGCCGTCCTACAG
ATGCGTCAGGGACTGTGGTAGTGTGCTCTCTGGAGGGAACACGTCCCATATTGATCGAGATCCAGGCTTTGGTCACAAAG
ACTAATTTCGGTCTGCCCAGAAGAACTTCTGTGGGTATTGACTATAACCGGGTTAATTTACTTATGGCAGTTTTGGAGAA
ACGTGCAGGCCTGGCACTGGGAAACTGTGATGCATACGTCAATCTTGCGGGCGGAATGAAGCTGGGGGAGCCGGCTATTG
ATCTGGGAATCGTGGCGGCTATCATATCCAGCTACAGGAACAGAACGGTGGACCCGGATACCCTGATTTTCGGCGAGGTC
GGTTTGTCGGGCGAGGTGCGGGGCGTCAGTCAGGCACAGCAGAGGGTGAAAGAGGCGGAAAAAATGGGATTTACCACCTG
TATTATGCCGAAAGCAAATCTGGAAGGGCTGCAGGGGGATTTTAAAATCGCCTTGATCGGAGTGGGTAATATCAAAGAGG
TTATGGGATATATATGA

Domains

Predicted by InterproScan.

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (10-36)

• AAA domain (AAA_25) (72-225)

• Subunit ChlI of Mg-chelatase (ChlI) (349-433)

3D structure

• AlphaFold DB: A0A7G5MXB4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA	Bacillus subtilis subsp. subtilis str. 168	58.206	99.782	0.581
radA	Streptococcus mitis NCTC 12261	56.484	99.345	0.561
radA	Streptococcus mitis SK321	56.264	99.345	0.559
radA	Streptococcus pneumoniae Rx1	56.264	99.345	0.559
radA	Streptococcus pneumoniae D39	56.264	99.345	0.559
radA	Streptococcus pneumoniae R6	56.264	99.345	0.559
radA	Streptococcus pneumoniae TIGR4	56.264	99.345	0.559