Detailed information NTG0035686

Bioinformatically predicted

Overview

• Name: recP/tkt
• Type: Machinery gene
• Locus tag: LL3_RS09325
• Genome accession: NC_017190
• Coordinates: 1882810..1884813 (+)
• Length: 667 a.a.
• NCBI ID: WP_013352417.1
• Uniprot ID: A0A9P1JHT7
• Organism: Bacillus amyloliquefaciens LL3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1877810..1889813

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LL3_RS21420 (LL3_01953)	-	1878210..1878359 (+)	150	WP_013352411.1	hypothetical protein	-
LL3_RS09290 (LL3_01954)	-	1878346..1879176 (+)	831	WP_013352412.1	prohibitin family protein	-
LL3_RS09295 (LL3_01955)	-	1879204..1879653 (-)	450	WP_013352413.1	YndM family protein	-
LL3_RS09300 (LL3_01956)	-	1879810..1880238 (+)	429	WP_013352414.1	hypothetical protein	-
LL3_RS09305 (LL3_01957)	dinR/lexA	1880587..1881207 (-)	621	WP_007611720.1	transcriptional repressor LexA	Regulator
LL3_RS09310 (LL3_01958)	yneA	1881364..1881675 (+)	312	WP_013352415.1	cell division suppressor protein YneA	-
LL3_RS09315 (LL3_01959)	-	1881691..1882341 (+)	651	WP_013352416.1	recombinase family protein	-
LL3_RS09320 (LL3_01960)	-	1882410..1882643 (+)	234	WP_003153997.1	DUF896 domain-containing protein	-
LL3_RS09325 (LL3_01961)	recP/tkt	1882810..1884813 (+)	2004	WP_013352417.1	transketolase	Machinery gene
LL3_RS09330 (LL3_01962)	sirA	1884964..1885410 (+)	447	WP_013352418.1	sporulation inhibitor of replication protein SirA	-
LL3_RS09335 (LL3_01963)	-	1885496..1885714 (+)	219	WP_003153994.1	YneF family protein	-
LL3_RS09340 (LL3_01964)	-	1885787..1885960 (-)	174	WP_088030684.1	aspartyl-phosphate phosphatase Spo0E family protein	-
LL3_RS09345 (LL3_01965)	-	1886162..1886869 (+)	708	WP_088030531.1	cytochrome c biogenesis protein CcdA	-
LL3_RS09350 (LL3_01966)	pilH	1886954..1887316 (+)	363	WP_013352421.1	response regulator	Machinery gene
LL3_RS09355 (LL3_01967)	-	1887396..1887887 (+)	492	WP_088030532.1	CcdC family protein	-
LL3_RS09360 (LL3_01968)	-	1887915..1888343 (-)	429	WP_013352423.1	DUF2621 domain-containing protein	-
LL3_RS09365 (LL3_01969)	-	1888578..1888949 (-)	372	WP_013352424.1	spore coat protein	-
LL3_RS09370 (LL3_01970)	-	1889043..1889189 (-)	147	WP_003153984.1	small acid-soluble spore protein P	-
LL3_RS09375 (LL3_01971)	sspO	1889219..1889365 (-)	147	WP_003153982.1	acid-soluble spore protein SspO	-

Sequence

Protein

• Length: 667 a.a.
• Molecular weight: 72570.62 Da
• Isoelectric Point: 4.8151

>NTDB_id=35686 LL3_RS09325 WP_013352417.1 1882810..1884813(+) (recP/tkt) [Bacillus amyloliquefaciens LL3]
MDTIEKKSVATIRTLSIDAIEKANSGHPGMPMGAAPMAYTLWTKFMNVNPQNPGWFNRDRFVLSAGHGSMLLYSMLHLSG
YDLSIDDLKQFRQWGSKTPGHPEFGHTAGVDATTGPLGQGIAMAVGMAIAERHLAETYNRDSFNVVDHYTYSICGDGDLM
EGISSEAASLAGHLELGRLIVLYDSNDISLDGDLDRSFSENVKQRFEAMNWEVLYVEDGNNIAELTAAIEKARQNDKKPT
LIEVKTTIGFGSPNRAGTSGVHGAPLGQEESKLTKEAYAWTFEEDFYVPDEVYAHFNQAVKEAGSKKEQEWNELFAAYQE
KYPELAEQLSLGMKGELPKDWDQEVPVYEKGSSLASRASSGEVLNGIAKKIPFFVGGSADLAGSNKTTIKNAGDFTARDY
AGKNFWFGVREFAMGAALNGMALHGGLRVFGGTFFVFSDYLRPAIRLASLMGLPVTYVFTHDSIAVGEDGPTHEPIEQLA
SLRALPNLSVIRPADGNETAAAWKLAVQSQDHPTALVLTRQNLPTIDQQAEEAYAGVEKGAYIVSKAQTDAPDALLLATG
SEVGLAIEAQAKLAEENVHVSVVSMPSWDRFEKQSAEYKNSVLPPNVTKRLAIEMGSSFGWGKFTGLEGDVLAIDRFGAS
APGETIMKEYGFTAENVADRVKKLLNK

Nucleotide

• Length: 2004 bp

>NTDB_id=35686 LL3_RS09325 WP_013352417.1 1882810..1884813(+) (recP/tkt) [Bacillus amyloliquefaciens LL3]
ATGGATACAATTGAAAAGAAATCAGTTGCCACCATACGTACACTGTCTATAGACGCAATTGAAAAAGCTAATTCCGGACA
CCCGGGCATGCCGATGGGAGCCGCTCCGATGGCTTACACGCTGTGGACGAAATTTATGAATGTGAATCCGCAGAATCCAG
GCTGGTTTAACCGCGACCGTTTTGTTTTATCAGCAGGACACGGTTCAATGCTTTTATACAGCATGCTGCATTTAAGCGGA
TATGACCTCAGCATTGATGATCTGAAACAGTTCCGTCAATGGGGAAGCAAAACACCGGGACATCCGGAGTTCGGACATAC
AGCAGGAGTAGACGCAACGACCGGGCCTCTCGGACAGGGTATCGCGATGGCAGTGGGAATGGCAATCGCAGAACGCCATC
TGGCTGAGACATATAACCGTGATTCATTCAACGTAGTTGATCATTATACATACAGTATTTGCGGAGACGGCGATTTGATG
GAAGGCATTTCTTCCGAAGCAGCTTCTCTTGCAGGCCATCTGGAGTTAGGCCGCCTGATCGTATTATACGATTCTAATGA
TATTTCTTTAGACGGTGATTTAGACCGTTCTTTCTCTGAAAATGTAAAACAGCGTTTTGAAGCAATGAACTGGGAAGTCC
TTTATGTTGAGGACGGAAATAACATCGCTGAATTGACGGCTGCAATTGAAAAAGCGCGCCAGAATGATAAAAAACCGACT
TTAATTGAAGTGAAGACCACAATCGGTTTCGGTTCTCCAAACCGCGCGGGTACATCTGGCGTTCACGGCGCTCCATTAGG
ACAAGAAGAGAGCAAGCTGACGAAAGAAGCGTACGCTTGGACATTTGAAGAAGATTTTTATGTTCCGGATGAAGTATACG
CGCATTTCAACCAAGCTGTAAAAGAAGCCGGCTCGAAAAAAGAACAGGAATGGAATGAACTGTTCGCGGCTTATCAAGAA
AAATATCCTGAGCTTGCTGAACAGCTGTCACTCGGAATGAAAGGCGAGCTTCCGAAAGACTGGGATCAGGAAGTTCCTGT
TTATGAAAAAGGCAGCAGTCTTGCTTCCCGCGCATCTTCAGGTGAGGTGCTGAACGGCATCGCTAAGAAAATTCCTTTCT
TTGTCGGGGGATCTGCTGACCTTGCGGGTTCAAACAAAACGACAATCAAAAATGCAGGAGACTTCACGGCCAGAGACTAC
GCCGGGAAAAACTTCTGGTTCGGGGTCCGTGAATTCGCGATGGGCGCTGCTTTAAACGGAATGGCGCTTCACGGCGGCCT
TCGCGTATTCGGCGGCACATTCTTTGTGTTCTCTGACTATTTAAGACCTGCCATTCGTCTGGCGTCATTAATGGGGCTGC
CTGTCACTTATGTATTCACGCATGACAGTATTGCCGTAGGAGAAGACGGACCGACTCACGAACCGATTGAGCAGCTTGCT
TCTTTACGCGCACTTCCTAACCTTTCTGTGATCAGACCTGCTGACGGAAATGAAACCGCAGCTGCGTGGAAGCTTGCCGT
TCAAAGCCAGGATCACCCGACAGCTCTTGTATTGACACGCCAAAACCTGCCGACAATTGATCAGCAGGCTGAAGAAGCGT
ATGCCGGAGTGGAAAAAGGGGCTTATATCGTTTCCAAAGCACAAACGGATGCACCGGACGCACTTCTTTTAGCGACGGGT
TCTGAAGTCGGACTCGCGATTGAAGCTCAGGCGAAGCTTGCTGAAGAAAACGTTCACGTTTCTGTAGTCAGCATGCCGAG
CTGGGACCGCTTCGAAAAACAATCGGCTGAGTACAAAAACAGCGTACTTCCTCCGAACGTAACGAAACGTCTTGCGATTG
AAATGGGATCAAGCTTCGGATGGGGCAAATTTACCGGTCTTGAAGGAGACGTTCTCGCAATTGACCGTTTCGGCGCTTCA
GCTCCGGGAGAAACAATTATGAAAGAATACGGGTTTACTGCAGAAAACGTGGCTGACCGCGTAAAAAAACTGCTAAACAA
ATAA

Domains

Predicted by InterProScan.

• Transketolase, pyrimidine binding domain (Transket_pyr) (354-524)

• Transketolase, thiamine diphosphate binding domain (Transketolase_N) (5-338)

• Transketolase, C-terminal domain (Transketolase_C) (549-657)

3D structure

• AlphaFold DB: A0A9P1JHT7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recP/tkt	Streptococcus pneumoniae TIGR4	55.891	99.25	0.555