Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | E5093_RS13860 | Genome accession | NZ_CP039031 |
| Coordinates | 2910651..2911286 (-) | Length | 211 a.a. |
| NCBI ID | WP_005180516.1 | Uniprot ID | N9MGL9 |
| Organism | Acinetobacter indicus strain yy_1 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2905651..2916286
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5093_RS13840 (E5093_13955) | aroK | 2906630..2907172 (-) | 543 | WP_075167858.1 | shikimate kinase AroK | - |
| E5093_RS13845 (E5093_13960) | pilQ | 2907209..2909347 (-) | 2139 | WP_177156229.1 | type IV pilus secretin PilQ | Machinery gene |
| E5093_RS13850 (E5093_13965) | pilP | 2909408..2909935 (-) | 528 | WP_045795346.1 | pilus assembly protein PilP | Machinery gene |
| E5093_RS13855 (E5093_13970) | pilO | 2909935..2910654 (-) | 720 | WP_005180513.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| E5093_RS13860 (E5093_13975) | pilN | 2910651..2911286 (-) | 636 | WP_005180516.1 | PilN domain-containing protein | Machinery gene |
| E5093_RS13865 (E5093_13980) | pilM | 2911286..2912344 (-) | 1059 | WP_005180518.1 | pilus assembly protein PilM | Machinery gene |
| E5093_RS13870 (E5093_13985) | ponA | 2912516..2915095 (+) | 2580 | WP_177156108.1 | penicillin-binding protein PBP1a | - |
| E5093_RS13875 (E5093_13990) | - | 2915144..2915948 (-) | 805 | Protein_2697 | putative RNA methyltransferase | - |
Sequence
Protein
Download Length: 211 a.a. Molecular weight: 23494.92 Da Isoelectric Point: 7.9757
>NTDB_id=356853 E5093_RS13860 WP_005180516.1 2910651..2911286(-) (pilN) [Acinetobacter indicus strain yy_1]
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
MAKINLLPWRDELREKRKKEFIAVCIGAALIGVLAVTLAWFYYNHKLQDQEQANQLVISTNQNLDVQLKSLEGLQEQRNA
IVERMKLIQGLQSQRPVAVRLVDELVRVTPSSMYLTKVARIGNKFTFEGKAESPNTVAEFLRNLEASPWYRNAFMNSFLA
VEENKNKAPSSVVPRVEESYGSFVVTADLDEIALPGTAPASGTQATAGAVQ
Nucleotide
Download Length: 636 bp
>NTDB_id=356853 E5093_RS13860 WP_005180516.1 2910651..2911286(-) (pilN) [Acinetobacter indicus strain yy_1]
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTGACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAAAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
ATGGCAAAAATTAACTTACTCCCTTGGCGTGATGAGCTAAGAGAAAAACGAAAAAAAGAATTTATTGCGGTTTGTATTGG
GGCTGCATTAATTGGGGTGCTGGCCGTGACGCTGGCATGGTTCTATTACAATCATAAACTTCAAGATCAGGAACAGGCCA
ATCAGCTGGTGATCAGTACCAACCAAAATCTGGATGTACAGTTAAAGTCGCTGGAAGGCCTGCAAGAGCAGCGTAATGCC
ATTGTCGAGCGCATGAAGCTGATTCAGGGTCTGCAAAGTCAGCGTCCGGTCGCGGTACGTTTGGTCGATGAGCTGGTCCG
CGTTACCCCAAGTAGCATGTATTTGACCAAAGTGGCCCGTATTGGCAATAAATTTACCTTTGAAGGCAAGGCCGAAAGTC
CAAACACGGTAGCAGAGTTCCTGCGTAATCTGGAAGCATCGCCATGGTATCGTAACGCCTTCATGAATTCTTTCTTGGCC
GTTGAAGAAAATAAAAACAAGGCACCAAGTTCGGTTGTTCCACGGGTAGAAGAAAGCTATGGCAGCTTCGTGGTAACGGC
AGATTTGGATGAAATTGCACTTCCAGGCACAGCACCTGCGTCTGGTACTCAAGCAACAGCGGGGGCAGTACAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
71.09 |
100 |
0.711 |
| comN | Acinetobacter baylyi ADP1 |
70.616 |
100 |
0.706 |