Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GQS52_RS13375 | Genome accession | NZ_CP046907 |
| Coordinates | 3034785..3035384 (+) | Length | 199 a.a. |
| NCBI ID | WP_182313672.1 | Uniprot ID | A0ABP6ABY1 |
| Organism | Streptomyces sp. SCUT-3 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3029785..3040384
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GQS52_RS13350 (GQS52_13310) | - | 3030979..3031371 (+) | 393 | WP_182313669.1 | hypothetical protein | - |
| GQS52_RS13365 (GQS52_13325) | - | 3031783..3034161 (+) | 2379 | WP_182313670.1 | DNA polymerase III subunit gamma and tau | - |
| GQS52_RS13370 (GQS52_13330) | - | 3034367..3034711 (+) | 345 | WP_182313671.1 | YbaB/EbfC family nucleoid-associated protein | - |
| GQS52_RS13375 (GQS52_13335) | recR | 3034785..3035384 (+) | 600 | WP_182313672.1 | recombination mediator RecR | Machinery gene |
| GQS52_RS13380 (GQS52_13340) | - | 3035377..3036060 (+) | 684 | WP_182313673.1 | DUF5063 domain-containing protein | - |
| GQS52_RS13385 (GQS52_13345) | - | 3036434..3037702 (+) | 1269 | WP_182313674.1 | aspartate kinase | - |
| GQS52_RS13390 (GQS52_13350) | - | 3037699..3038766 (+) | 1068 | WP_182313675.1 | aspartate-semialdehyde dehydrogenase | - |
| GQS52_RS13395 (GQS52_13355) | - | 3039157..3039723 (+) | 567 | WP_182313676.1 | SigE family RNA polymerase sigma factor | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 21846.15 Da Isoelectric Point: 5.1758
>NTDB_id=356718 GQS52_RS13375 WP_182313672.1 3034785..3035384(+) (recR) [Streptomyces sp. SCUT-3]
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHVLQADPADVRRLARALTEVKERVRFCAVCGNVAQDERCRVCLDPRRDRAV
ICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRELLARLADGTVTELILATDPNLEGEATATYLARMVK
PMGLTVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
MYEGVVQDLIDELGRLPGVGPKSAQRIAFHVLQADPADVRRLARALTEVKERVRFCAVCGNVAQDERCRVCLDPRRDRAV
ICVVEEPKDVVAIERTREFRGRYHVLGGAISPIEGVGPDDLRIRELLARLADGTVTELILATDPNLEGEATATYLARMVK
PMGLTVTRLASGLPVGGDLEYADEVTLGRAFEGRRLLDV
Nucleotide
Download Length: 600 bp
>NTDB_id=356718 GQS52_RS13375 WP_182313672.1 3034785..3035384(+) (recR) [Streptomyces sp. SCUT-3]
GTGTACGAAGGCGTGGTCCAGGACCTGATCGACGAGCTGGGCAGGCTGCCCGGTGTGGGTCCCAAGAGTGCGCAGCGGAT
CGCCTTCCACGTGCTCCAGGCGGACCCCGCCGACGTGCGCAGGCTCGCCCGCGCGCTCACCGAGGTCAAGGAGCGGGTGC
GCTTCTGCGCGGTCTGCGGCAACGTGGCGCAGGACGAGCGGTGCCGGGTGTGCCTGGACCCGCGGCGCGACCGGGCGGTG
ATCTGCGTGGTCGAGGAGCCCAAGGACGTGGTCGCGATCGAGCGCACCCGGGAGTTCCGGGGCCGCTACCACGTCCTCGG
CGGGGCGATCAGCCCGATCGAGGGCGTGGGCCCGGACGACCTGAGGATCCGGGAGCTGCTGGCCCGGCTCGCCGACGGCA
CCGTCACCGAGCTGATCCTCGCCACGGACCCGAATCTGGAAGGGGAGGCGACAGCCACCTATCTCGCCCGTATGGTCAAA
CCCATGGGTTTGACAGTGACCCGGCTGGCCAGTGGTCTCCCTGTCGGGGGAGATCTTGAATATGCCGATGAGGTCACGCT
CGGGCGGGCCTTCGAGGGGAGACGATTGCTCGATGTCTGA
GTGTACGAAGGCGTGGTCCAGGACCTGATCGACGAGCTGGGCAGGCTGCCCGGTGTGGGTCCCAAGAGTGCGCAGCGGAT
CGCCTTCCACGTGCTCCAGGCGGACCCCGCCGACGTGCGCAGGCTCGCCCGCGCGCTCACCGAGGTCAAGGAGCGGGTGC
GCTTCTGCGCGGTCTGCGGCAACGTGGCGCAGGACGAGCGGTGCCGGGTGTGCCTGGACCCGCGGCGCGACCGGGCGGTG
ATCTGCGTGGTCGAGGAGCCCAAGGACGTGGTCGCGATCGAGCGCACCCGGGAGTTCCGGGGCCGCTACCACGTCCTCGG
CGGGGCGATCAGCCCGATCGAGGGCGTGGGCCCGGACGACCTGAGGATCCGGGAGCTGCTGGCCCGGCTCGCCGACGGCA
CCGTCACCGAGCTGATCCTCGCCACGGACCCGAATCTGGAAGGGGAGGCGACAGCCACCTATCTCGCCCGTATGGTCAAA
CCCATGGGTTTGACAGTGACCCGGCTGGCCAGTGGTCTCCCTGTCGGGGGAGATCTTGAATATGCCGATGAGGTCACGCT
CGGGCGGGCCTTCGAGGGGAGACGATTGCTCGATGTCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
55.102 |
98.492 |
0.543 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
54.639 |
97.487 |
0.533 |
| recR | Streptococcus pneumoniae R6 |
46.392 |
97.487 |
0.452 |