Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   RI02_RS05410 Genome accession   NZ_CP039020
Coordinates   1084772..1084969 (+) Length   65 a.a.
NCBI ID   WP_017367008.1    Uniprot ID   -
Organism   Bacillus altitudinis strain BA06     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1079772..1089969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  RI02_RS05380 (RI02_05455) - 1080172..1080351 (+) 180 WP_008348517.1 YjzC family protein -
  RI02_RS05385 (RI02_05460) - 1080521..1081786 (+) 1266 WP_007499050.1 MFS transporter -
  RI02_RS05390 (RI02_05465) - 1081906..1082100 (-) 195 WP_008348514.1 YjzD family protein -
  RI02_RS05395 (RI02_05470) - 1082313..1083053 (+) 741 WP_007499048.1 hypothetical protein -
  RI02_RS05400 (RI02_05475) - 1083129..1083704 (+) 576 WP_017367007.1 hypothetical protein -
  RI02_RS05405 (RI02_05480) med 1083795..1084760 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  RI02_RS05410 (RI02_05485) comZ 1084772..1084969 (+) 198 WP_017367008.1 ComZ family protein Regulator
  RI02_RS05415 (RI02_05490) - 1084980..1085213 (-) 234 WP_008348506.1 hypothetical protein -
  RI02_RS05420 (RI02_05495) - 1085383..1086321 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  RI02_RS05425 (RI02_05500) fabF 1086343..1087584 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  RI02_RS05430 (RI02_05505) - 1087662..1088456 (+) 795 WP_017367009.1 DUF2268 domain-containing protein -
  RI02_RS05435 (RI02_05510) - 1088627..1089607 (+) 981 WP_017367010.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7346.42 Da        Isoelectric Point: 4.3178

>NTDB_id=356707 RI02_RS05410 WP_017367008.1 1084772..1084969(+) (comZ) [Bacillus altitudinis strain BA06]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQVLQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=356707 RI02_RS05410 WP_017367008.1 1084772..1084969(+) (comZ) [Bacillus altitudinis strain BA06]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGTACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.852

93.846

0.646

Multiple sequence alignment