Detailed information NTG0356706

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: RI02_RS05405
• Genome accession: NZ_CP039020
• Coordinates: 1083795..1084760 (+)
• Length: 321 a.a.
• NCBI ID: WP_008348509.1
• Uniprot ID: A0A9X0FWP2
• Organism: Bacillus altitudinis strain BA06
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1078795..1089760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RI02_RS05375 (RI02_05450)	argF	1079118..1080068 (+)	951	WP_008348520.1	ornithine carbamoyltransferase	-
RI02_RS05380 (RI02_05455)	-	1080172..1080351 (+)	180	WP_008348517.1	YjzC family protein	-
RI02_RS05385 (RI02_05460)	-	1080521..1081786 (+)	1266	WP_007499050.1	MFS transporter	-
RI02_RS05390 (RI02_05465)	-	1081906..1082100 (-)	195	WP_008348514.1	YjzD family protein	-
RI02_RS05395 (RI02_05470)	-	1082313..1083053 (+)	741	WP_007499048.1	hypothetical protein	-
RI02_RS05400 (RI02_05475)	-	1083129..1083704 (+)	576	WP_017367007.1	hypothetical protein	-
RI02_RS05405 (RI02_05480)	med	1083795..1084760 (+)	966	WP_008348509.1	BMP family ABC transporter substrate-binding protein	Regulator
RI02_RS05410 (RI02_05485)	comZ	1084772..1084969 (+)	198	WP_017367008.1	ComZ family protein	Regulator
RI02_RS05415 (RI02_05490)	-	1084980..1085213 (-)	234	WP_008348506.1	hypothetical protein	-
RI02_RS05420 (RI02_05495)	-	1085383..1086321 (+)	939	WP_008348504.1	beta-ketoacyl-ACP synthase III	-
RI02_RS05425 (RI02_05500)	fabF	1086343..1087584 (+)	1242	WP_008348501.1	beta-ketoacyl-ACP synthase II	-
RI02_RS05430 (RI02_05505)	-	1087662..1088456 (+)	795	WP_017367009.1	DUF2268 domain-containing protein	-
RI02_RS05435 (RI02_05510)	-	1088627..1089607 (+)	981	WP_017367010.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 321 a.a.
• Molecular weight: 35902.89 Da
• Isoelectric Point: 5.9297

>NTDB_id=356706 RI02_RS05405 WP_008348509.1 1083795..1084760(+) (med) [Bacillus altitudinis strain BA06]
MKYQRLVMIFSFLLLMLSACSQAPLKGHIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAI
EEFHKKGVNLIIGHGNEYSEIFNLISEDYPKTQFITVNGGKPQADNVTNVTFKGEAMGFFGGMTAAHMSKTKKIGILATY
DWQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVNLYQKLKKQGVDVVYPAGDGYNIPVIEQIKNDNLSAIGYVTDQ
SNLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFVKDIEKDIANYKKTGKLPNE
K

Nucleotide

• Length: 966 bp

>NTDB_id=356706 RI02_RS05405 WP_008348509.1 1083795..1084760(+) (med) [Bacillus altitudinis strain BA06]
ATGAAGTACCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTTCTTATGCTATCTGCCTGCTCGCAGGCGCCGTTAAAAGG
ACATATTGAGAAGGTGGGTTTACTCGTCCCCGATACGATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTAT
TAAATATCCAATCAACATTTGGTGTAGATGTTTATTATAAGGAAGGGATGGTCGACAAGGAGAAAATCGTTGATGCCATT
GAAGAATTTCATAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAATGAATACAGCGAAATTTTCAACTTGATCAGTGA
AGATTATCCGAAAACACAATTTATCACGGTCAATGGAGGCAAGCCTCAAGCTGATAATGTCACAAACGTCACGTTTAAAG
GAGAAGCAATGGGCTTTTTCGGAGGCATGACAGCAGCACATATGTCCAAAACAAAAAAGATTGGTATTCTGGCTACATAT
GATTGGCAAAGTGAAGTAGACGGTTTTATCAAAGGTGCAAAATATCAGGATGAACATGTGCAAGTCCTAGCGGAATTTGT
CGAAAACTGGGATGATGCTGACAAAGCGGTGAACCTCTATCAAAAATTGAAAAAACAAGGTGTAGATGTTGTGTATCCAG
CAGGTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAAACGACAATTTATCTGCGATCGGATATGTCACTGATCAA
TCCAACCTTGGAAGCCATACGGTGTTAACTAGCACAGTCCAGCATGTCGATAAAGCGTACAGTATCATTGCGAAGAAGTT
TAATGAAGGCAAGCTAAACGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGCT
CAACCATAGACCGCGCTTTTGTGAAAGACATTGAGAAGGATATTGCGAATTACAAAAAAACAGGCAAACTGCCAAATGAA
AAGTGA

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (29-320)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	64.65	97.819	0.632