Detailed information NTG0356152

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: E5136_RS04660
• Genome accession: NZ_CP038874
• Coordinates: 963833..964954 (-)
• Length: 373 a.a.
• NCBI ID: WP_064972587.1
• Uniprot ID: -
• Organism: Pasteurella multocida strain FCf76
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 958833..969954

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5136_RS04645 (E5136_04650)	tal	959653..960606 (-)	954	WP_005755204.1	transaldolase	-
E5136_RS04650 (E5136_04655)	-	960764..961315 (+)	552	WP_061406346.1	DNA-3-methyladenine glycosylase I	-
E5136_RS04655 (E5136_04660)	lptD	961379..963727 (+)	2349	WP_061406345.1	LPS assembly protein LptD	-
E5136_RS04660 (E5136_04665)	dprA	963833..964954 (-)	1122	WP_064972587.1	DNA-processing protein DprA	Machinery gene
E5136_RS04665 (E5136_04670)	-	965107..965700 (-)	594	WP_005718382.1	cytochrome c3 family protein	-
E5136_RS04670 (E5136_04675)	-	965716..966141 (-)	426	WP_005718380.1	nitrate reductase cytochrome c-type subunit	-
E5136_RS04675 (E5136_04680)	napH	966147..967022 (-)	876	WP_005724438.1	quinol dehydrogenase ferredoxin subunit NapH	-
E5136_RS04680 (E5136_04685)	napG	967022..967774 (-)	753	WP_005752143.1	ferredoxin-type protein NapG	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 41616.78 Da
• Isoelectric Point: 6.1359

>NTDB_id=356152 E5136_RS04660 WP_064972587.1 963833..964954(-) (dprA) [Pasteurella multocida strain FCf76]
MSSYLPLLLRLLQIPRLGSLAIQRLLEHVSPAELMEYDTKAFQQIGWTTQQIQCWFTPENRYIDPTLAWVNEQQHIVDWF
DPHYPPLLKQTEGAPLVLFVKGEVATLSAQQVAIVGSRHCSRYGEYWANYFATQLAYADIVVTSGLALGIDGFSHQAVVD
IHGKTIAVLGSGLEVIYPKKHRGLAEKIIEHQGALVSEFLPFQPPVAENFPRRNRIISGLSLGTLVIEASEHSGSLITAR
YALEQNRDVFALPGQIQHGFSQGCHKLIKQGAILVESIQDILEHLSPYSHCAMPALPRTENAFSQQVTDTSTINTARITP
EHPELYAKIGYMPVSIDVLAQQVNLPIDTLLVQLLTLELQDLIVAENGLYQRK

Nucleotide

• Length: 1122 bp

>NTDB_id=356152 E5136_RS04660 WP_064972587.1 963833..964954(-) (dprA) [Pasteurella multocida strain FCf76]
ATGTCATCTTATCTGCCTCTTTTATTACGTTTGTTACAAATTCCGCGTTTGGGTTCGCTGGCGATCCAGCGTTTATTGGA
GCACGTCAGTCCAGCGGAATTAATGGAATATGATACAAAAGCCTTTCAACAGATAGGCTGGACGACACAGCAGATTCAGT
GTTGGTTTACGCCTGAGAACCGTTATATTGATCCCACGTTAGCCTGGGTAAACGAACAACAACATATTGTGGATTGGTTT
GATCCTCATTATCCTCCCTTGTTAAAGCAAACAGAAGGGGCTCCACTTGTCTTGTTTGTGAAAGGGGAAGTGGCTACGCT
ATCTGCACAGCAAGTGGCGATCGTGGGCAGTCGTCATTGTTCACGTTATGGGGAATACTGGGCAAACTATTTCGCCACCC
AACTGGCTTATGCCGATATTGTGGTGACCAGTGGTTTAGCGTTAGGTATTGATGGTTTCTCACATCAAGCGGTGGTGGAT
ATCCACGGGAAGACGATTGCAGTATTAGGCAGTGGTTTAGAGGTCATTTATCCGAAAAAACACCGAGGTTTAGCCGAAAA
AATTATTGAACATCAAGGTGCGTTAGTGTCTGAATTTTTACCTTTCCAACCCCCTGTGGCAGAAAATTTTCCACGTCGTA
ATCGCATTATTAGTGGTTTATCTTTGGGGACATTAGTCATTGAAGCCTCAGAACACAGTGGTTCTTTAATTACTGCCCGC
TATGCTTTAGAGCAAAATCGAGATGTTTTTGCGTTACCGGGGCAGATTCAGCATGGATTTAGCCAAGGTTGTCATAAACT
GATTAAACAGGGGGCAATATTAGTCGAAAGTATTCAGGATATTTTAGAACATCTCTCGCCTTATTCGCATTGTGCCATGC
CAGCGTTGCCTCGTACGGAGAACGCCTTTTCTCAACAGGTAACAGACACATCAACCATCAATACTGCGCGGATAACGCCA
GAACATCCGGAATTATATGCCAAAATTGGCTATATGCCCGTCAGTATTGATGTATTAGCCCAACAAGTCAATCTACCTAT
TGATACTTTATTAGTACAGCTTTTAACCTTGGAATTGCAAGACTTGATTGTTGCTGAAAATGGATTATATCAGCGTAAAT
AA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (319-367)

• DNA recombination-mediator protein A (DNA_processg_A) (73-276)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	59.73	99.196	0.592
dprA	Glaesserella parasuis strain SC1401	52.286	93.834	0.491
dprA	Vibrio cholerae strain A1552	45.455	100	0.456
dprA	Vibrio campbellii strain DS40M4	44.865	99.196	0.445
dprA	Legionella pneumophila strain ERS1305867	39.353	99.464	0.391