Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | E5Z46_RS15955 | Genome accession | NZ_CP038860 |
| Coordinates | 3060298..3061371 (-) | Length | 357 a.a. |
| NCBI ID | WP_011231917.1 | Uniprot ID | Q5KX66 |
| Organism | Geobacillus kaustophilus NBRC 102445 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3055298..3066371
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5Z46_RS15915 (E5Z46_15905) | - | 3056039..3056833 (+) | 795 | WP_042380976.1 | YqhG family protein | - |
| E5Z46_RS15920 (E5Z46_15910) | - | 3056936..3057115 (-) | 180 | WP_011231910.1 | YqzE family protein | - |
| E5Z46_RS15925 (E5Z46_15915) | comGG | 3057163..3057552 (-) | 390 | WP_042380980.1 | competence type IV pilus minor pilin ComGG | - |
| E5Z46_RS15930 (E5Z46_15920) | comGF | 3057627..3058073 (-) | 447 | WP_042380983.1 | competence type IV pilus minor pilin ComGF | - |
| E5Z46_RS15935 (E5Z46_15925) | - | 3058052..3058378 (-) | 327 | WP_042380986.1 | type II secretion system protein | - |
| E5Z46_RS15940 (E5Z46_15930) | comGD | 3058362..3058799 (-) | 438 | WP_033004731.1 | competence type IV pilus minor pilin ComGD | - |
| E5Z46_RS15945 (E5Z46_15935) | comGC | 3058789..3059085 (-) | 297 | WP_075261488.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E5Z46_RS15950 (E5Z46_15940) | comGB | 3059273..3060301 (-) | 1029 | WP_042380993.1 | competence type IV pilus assembly protein ComGB | - |
| E5Z46_RS15955 (E5Z46_15945) | comGA | 3060298..3061371 (-) | 1074 | WP_011231917.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E5Z46_RS15960 (E5Z46_15950) | - | 3061564..3062262 (+) | 699 | WP_011231918.1 | helix-turn-helix transcriptional regulator | - |
| E5Z46_RS15965 (E5Z46_15955) | - | 3062421..3062663 (+) | 243 | WP_008879854.1 | DUF2626 family protein | - |
| E5Z46_RS15970 (E5Z46_15960) | - | 3062747..3063880 (-) | 1134 | WP_020278526.1 | class I SAM-dependent methyltransferase | - |
| E5Z46_RS15975 (E5Z46_15965) | - | 3064202..3064834 (-) | 633 | WP_014196343.1 | MBL fold metallo-hydrolase | - |
| E5Z46_RS15980 (E5Z46_15970) | - | 3065004..3065180 (+) | 177 | WP_011231921.1 | DUF2759 domain-containing protein | - |
Sequence
Protein
Download Length: 357 a.a. Molecular weight: 39570.00 Da Isoelectric Point: 8.7901
>NTDB_id=356006 E5Z46_RS15955 WP_011231917.1 3060298..3061371(-) (comGA) [Geobacillus kaustophilus NBRC 102445]
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
MLNEIEQTANRLLAEAVQRRASDLHLVPRRRDAAVRLRLDGMLVDVGVLSKETAERLIAHFKFLAGMDIGERRRPQSGAM
EVAEFGETVYLRLSTLPTLYDESLVIRLLPQRFSLPLRELSLFFRSTARLFSFMQHPQGLVLLTGPTGSGKTTTLYTLLD
LCQAERQRNIITLEDPIEKQNERLLQVQINEKAGITYAAGLKAALRHDPDVLMVGEIRDHDTAAIAIRSALSGHLVVSTM
HAADAVGAVYRLHEFGIPLGDLAETLLAVSAQRLVELCCPLCGDDCHPSCGRLGRRRRTAVYELLCGSALEDVIRSLSNG
RGKPKRSYMTLARLIRKGIALGYLPVRMLELVGGGER
Nucleotide
Download Length: 1074 bp
>NTDB_id=356006 E5Z46_RS15955 WP_011231917.1 3060298..3061371(-) (comGA) [Geobacillus kaustophilus NBRC 102445]
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCTTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
GTGCTGAACGAGATCGAACAAACGGCAAACCGCCTTCTCGCCGAAGCGGTGCAGCGCCGCGCCTCGGATCTTCACCTCGT
TCCGCGCCGCCGCGATGCCGCTGTTCGTCTTCGGCTTGATGGCATGCTTGTCGACGTTGGCGTGCTTTCGAAGGAAACGG
CGGAACGTCTCATCGCCCACTTTAAATTTTTAGCCGGCATGGACATCGGGGAACGACGCCGTCCGCAAAGCGGCGCCATG
GAAGTGGCTGAGTTTGGGGAAACGGTGTATTTGCGTTTATCGACATTGCCGACGCTCTACGATGAAAGCCTCGTCATTCG
GCTTCTGCCGCAGCGCTTCTCGCTGCCGCTTCGCGAACTATCTTTATTCTTCCGCTCCACCGCACGATTATTTTCCTTCA
TGCAGCATCCGCAAGGGCTTGTGCTGTTGACCGGCCCGACGGGGTCGGGAAAAACGACGACCCTCTACACCCTTCTTGAT
CTTTGCCAAGCTGAAAGGCAACGCAACATCATCACGCTTGAAGATCCGATCGAAAAACAGAACGAACGATTGTTGCAAGT
GCAAATCAATGAAAAAGCAGGCATCACATACGCCGCCGGGTTAAAAGCGGCGCTGCGCCATGACCCGGATGTGTTGATGG
TCGGCGAGATCCGCGATCATGATACGGCGGCCATTGCCATCCGTTCAGCGTTGAGCGGCCATTTGGTCGTCTCGACGATG
CACGCCGCCGATGCAGTCGGCGCCGTCTACCGGCTGCATGAATTCGGCATTCCGCTCGGCGATTTGGCCGAGACGCTGCT
TGCCGTCTCTGCCCAGCGGCTTGTCGAGCTTTGCTGCCCGCTGTGCGGCGACGATTGCCATCCATCGTGCGGCCGTCTTG
GACGACGCCGGCGCACGGCTGTTTATGAGTTGCTTTGCGGTTCAGCGCTGGAGGACGTGATTCGTTCCCTCTCCAATGGG
AGAGGGAAGCCAAAGCGCTCTTATATGACGCTGGCGCGCTTGATCCGCAAGGGGATTGCGCTCGGCTACCTGCCCGTTCG
CATGCTTGAGCTCGTCGGAGGGGGAGAAAGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
50.725 |
96.639 |
0.49 |