Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | E5284_RS15065 | Genome accession | NZ_CP038856 |
| Coordinates | 3115282..3115896 (-) | Length | 204 a.a. |
| NCBI ID | WP_115258917.1 | Uniprot ID | A0A4V6CGY5 |
| Organism | Citrobacter freundii strain Upstream_1 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3110282..3120896
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E5284_RS15050 (E5284_15090) | helD | 3110506..3112560 (-) | 2055 | WP_135912311.1 | DNA helicase IV | - |
| E5284_RS15055 (E5284_15095) | - | 3112686..3113132 (+) | 447 | WP_096757638.1 | YccF domain-containing protein | - |
| E5284_RS15060 (E5284_15100) | yccS | 3113151..3115304 (+) | 2154 | WP_096759437.1 | YccS family putative transporter | - |
| E5284_RS15065 (E5284_15105) | sxy/tfoX | 3115282..3115896 (-) | 615 | WP_115258917.1 | TfoX/Sxy family DNA transformation protein | Regulator |
| E5284_RS15070 (E5284_15110) | sulA | 3116113..3116622 (+) | 510 | WP_096757640.1 | SOS-induced cell division inhibitor SulA | - |
| E5284_RS15075 (E5284_15115) | ompA | 3116978..3118036 (+) | 1059 | WP_115259970.1 | porin OmpA | - |
| E5284_RS15080 (E5284_15120) | matP | 3118135..3118587 (-) | 453 | WP_096757641.1 | macrodomain Ter protein MatP | - |
| E5284_RS15085 (E5284_15125) | - | 3118773..3120533 (+) | 1761 | WP_115258918.1 | Lon protease family protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23197.78 Da Isoelectric Point: 9.1904
>NTDB_id=355915 E5284_RS15065 WP_115258917.1 3115282..3115896(-) (sxy/tfoX) [Citrobacter freundii strain Upstream_1]
MKNLSYARIYKSQEYLASLGTISYRSLFGSYSLTVGDTVFAMVADGELYLRACEQSVQYCVKHSPVWLTFMKRGRPVILN
YYQVNDALWRNHPQLVSLSRYSLDAAVKEKQTRVSQHRLRELPNISFHLETLLSEAGINDEGTLRTLGAQMCWLKLLQIN
PSLTVKILYALEGAISGIHEAALPAVRRRELVEWVSSLKPEPGY
MKNLSYARIYKSQEYLASLGTISYRSLFGSYSLTVGDTVFAMVADGELYLRACEQSVQYCVKHSPVWLTFMKRGRPVILN
YYQVNDALWRNHPQLVSLSRYSLDAAVKEKQTRVSQHRLRELPNISFHLETLLSEAGINDEGTLRTLGAQMCWLKLLQIN
PSLTVKILYALEGAISGIHEAALPAVRRRELVEWVSSLKPEPGY
Nucleotide
Download Length: 615 bp
>NTDB_id=355915 E5284_RS15065 WP_115258917.1 3115282..3115896(-) (sxy/tfoX) [Citrobacter freundii strain Upstream_1]
ATGAAAAACCTCTCTTATGCCAGGATCTATAAATCACAAGAATATTTGGCCTCTTTAGGTACAATTAGCTACCGCTCTTT
ATTTGGCAGTTATAGCTTGACGGTGGGTGATACGGTCTTTGCAATGGTTGCCGACGGTGAGTTATACCTGCGGGCCTGTG
AGCAAAGCGTACAGTACTGTGTCAAACATTCCCCGGTCTGGTTGACGTTTATGAAGCGGGGACGTCCCGTGATACTCAAC
TATTATCAAGTTAATGATGCGCTGTGGCGAAACCATCCGCAGTTGGTGTCTTTATCACGATATTCGCTGGATGCCGCAGT
AAAAGAAAAACAGACGCGTGTTTCGCAACACCGGTTACGGGAACTGCCGAACATTTCCTTTCATCTGGAGACCCTACTGA
GTGAAGCCGGGATTAACGATGAGGGTACATTACGCACCCTGGGTGCTCAAATGTGTTGGCTAAAGCTTTTGCAAATTAAC
CCATCGCTGACAGTGAAAATTCTTTATGCGCTTGAGGGCGCAATCAGTGGGATACATGAAGCAGCACTCCCGGCGGTTCG
CCGCCGGGAGTTGGTTGAGTGGGTGAGTTCACTTAAGCCTGAACCGGGTTACTAA
ATGAAAAACCTCTCTTATGCCAGGATCTATAAATCACAAGAATATTTGGCCTCTTTAGGTACAATTAGCTACCGCTCTTT
ATTTGGCAGTTATAGCTTGACGGTGGGTGATACGGTCTTTGCAATGGTTGCCGACGGTGAGTTATACCTGCGGGCCTGTG
AGCAAAGCGTACAGTACTGTGTCAAACATTCCCCGGTCTGGTTGACGTTTATGAAGCGGGGACGTCCCGTGATACTCAAC
TATTATCAAGTTAATGATGCGCTGTGGCGAAACCATCCGCAGTTGGTGTCTTTATCACGATATTCGCTGGATGCCGCAGT
AAAAGAAAAACAGACGCGTGTTTCGCAACACCGGTTACGGGAACTGCCGAACATTTCCTTTCATCTGGAGACCCTACTGA
GTGAAGCCGGGATTAACGATGAGGGTACATTACGCACCCTGGGTGCTCAAATGTGTTGGCTAAAGCTTTTGCAAATTAAC
CCATCGCTGACAGTGAAAATTCTTTATGCGCTTGAGGGCGCAATCAGTGGGATACATGAAGCAGCACTCCCGGCGGTTCG
CCGCCGGGAGTTGGTTGAGTGGGTGAGTTCACTTAAGCCTGAACCGGGTTACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Escherichia coli BW25113 strain K-12 |
69.608 |
100 |
0.696 |