Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | SaO82_RS07830 | Genome accession | NZ_CP038819 |
| Coordinates | 1589425..1590495 (-) | Length | 356 a.a. |
| NCBI ID | WP_000776417.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain O82 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1584425..1595495
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SaO82_RS07790 (SaO82_1460) | gcvPA | 1584602..1585948 (-) | 1347 | WP_000019686.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| SaO82_RS07795 (SaO82_1461) | gcvT | 1585968..1587059 (-) | 1092 | WP_000093349.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| SaO82_RS07800 (SaO82_1462) | - | 1587218..1587742 (-) | 525 | WP_001015120.1 | shikimate kinase | - |
| SaO82_RS07805 | - | 1587732..1587878 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| SaO82_RS07810 (SaO82_1463) | comGF | 1587975..1588472 (-) | 498 | WP_029656266.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| SaO82_RS07815 (SaO82_1464) | comGE | 1588390..1588689 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| SaO82_RS07820 (SaO82_1465) | comGD | 1588676..1589122 (-) | 447 | WP_001791207.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| SaO82_RS07825 (SaO82_1466) | comGC | 1589100..1589411 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| SaO82_RS07830 (SaO82_1467) | comGB | 1589425..1590495 (-) | 1071 | WP_000776417.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| SaO82_RS07835 (SaO82_1468) | comGA | 1590467..1591441 (-) | 975 | WP_000697222.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| SaO82_RS07840 (SaO82_1469) | - | 1591493..1592116 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| SaO82_RS07845 (SaO82_1470) | - | 1592113..1592442 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| SaO82_RS07850 (SaO82_1471) | - | 1592442..1593428 (-) | 987 | WP_000161315.1 | ROK family glucokinase | - |
| SaO82_RS07855 | - | 1593425..1593628 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
| SaO82_RS07860 (SaO82_1472) | - | 1593609..1595072 (-) | 1464 | WP_001017867.1 | rhomboid family intramembrane serine protease | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 41495.93 Da Isoelectric Point: 10.1030
>NTDB_id=355808 SaO82_RS07830 WP_000776417.1 1589425..1590495(-) (comGB) [Staphylococcus aureus strain O82]
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKFNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
MKLQWINTFKLHSKKRQLSKAQQIDLLSNLCNLLKYGFTLYQSFQFLNLQMTYKNKQLGTTILSEISNGAPCNQILSLIG
YSDTIVMQVYLAERFGNIIDVLEETVNYMKVNRKSEQRLLKTLQYPLILVSIFIAMIIILNLTVIPQFQQLYTSMNIQLS
SFQKTLSFFITSLPTIIVVMLIIVSMLAIIMKLIYNKFNMLNKINFVMKLPLISGYFQLFKTYFVTNELVLFYKNGITLQ
SIVDVYINHSSDPFRQFLGKYLLTYSEMGYGLPQILEKLKCFKPQLIKFVLQGEKRGKLEVELKLYSQILVKQIEDKAIK
QTQFLQPILFLILGLFIVAIYLVIMLPMFQMMQSIK
Nucleotide
Download Length: 1071 bp
>NTDB_id=355808 SaO82_RS07830 WP_000776417.1 1589425..1590495(-) (comGB) [Staphylococcus aureus strain O82]
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATTATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTGATTTATAACAAATTTAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAATTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
GTGAAACTACAATGGATAAATACATTTAAACTACATTCTAAGAAGCGACAATTAAGTAAGGCCCAACAAATCGATTTACT
TTCAAATTTATGTAATTTGTTGAAATATGGTTTCACTCTGTATCAAAGTTTTCAATTTTTAAATCTTCAAATGACATATA
AAAATAAGCAATTAGGTACCACCATTCTAAGTGAAATTTCAAATGGTGCACCATGCAATCAGATATTATCACTGATAGGT
TATAGCGATACTATCGTCATGCAAGTATATTTGGCAGAAAGATTTGGCAATATTATAGACGTTCTAGAAGAAACCGTAAA
TTATATGAAAGTGAATAGAAAGTCAGAACAACGATTGTTAAAGACACTGCAATACCCCTTAATACTAGTTTCTATTTTTA
TTGCTATGATTATTATATTAAACCTCACAGTAATTCCACAGTTTCAACAATTATATACTTCTATGAATATTCAACTATCT
TCTTTTCAAAAAACATTGTCTTTTTTCATTACCAGCTTACCTACTATAATTGTAGTAATGCTCATAATAGTATCTATGTT
GGCTATTATTATGAAATTGATTTATAACAAATTTAATATGCTCAATAAGATAAACTTTGTGATGAAACTACCGCTAATAT
CAGGCTATTTCCAATTATTTAAAACTTATTTTGTAACTAATGAATTAGTGTTGTTTTATAAAAATGGTATTACACTTCAA
TCAATAGTAGACGTTTATATTAACCATAGTAGTGATCCATTTAGACAGTTTCTAGGTAAATACTTATTAACTTATTCAGA
AATGGGATATGGTTTGCCTCAAATTTTAGAAAAATTAAAATGCTTTAAGCCTCAATTAATTAAGTTTGTGCTACAAGGTG
AAAAGAGAGGGAAGCTAGAAGTAGAACTAAAGTTATATTCGCAAATATTAGTAAAACAAATAGAAGATAAAGCGATAAAA
CAGACTCAGTTTTTACAGCCTATTTTATTTTTGATTTTAGGTTTATTTATTGTCGCAATTTATTTAGTAATTATGTTACC
AATGTTTCAAATGATGCAAAGTATAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Staphylococcus aureus MW2 |
99.438 |
100 |
0.994 |
| comGB | Staphylococcus aureus N315 |
99.438 |
100 |
0.994 |