Detailed information NTG0355761

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: KAN01_RS18710
• Genome accession: NZ_CP038816
• Coordinates: 3438025..3438885 (+)
• Length: 286 a.a.
• NCBI ID: WP_004710834.1
• Uniprot ID: A0AB36M6L9
• Organism: Acinetobacter nosocomialis strain KAN01
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3433025..3443885

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KAN01_RS16700 (KAN01_16700)	secG	3433632..3433961 (-)	330	WP_002156913.1	preprotein translocase subunit SecG	-
KAN01_RS16705 (KAN01_16705)	tpiA	3433974..3434768 (-)	795	WP_135925489.1	triose-phosphate isomerase	-
KAN01_RS16710 (KAN01_16710)	pilB	3435059..3436771 (+)	1713	WP_004710829.1	type IV-A pilus assembly ATPase PilB	Machinery gene
KAN01_RS16715 (KAN01_16715)	pilC	3436799..3438025 (+)	1227	WP_004710832.1	type II secretion system F family protein	Machinery gene
KAN01_RS18710 (KAN01_16720)	pilD	3438025..3438885 (+)	861	WP_004710834.1	prepilin peptidase	Machinery gene
KAN01_RS16725 (KAN01_16725)	coaE	3438887..3439483 (+)	597	WP_000874125.1	dephospho-CoA kinase	-
KAN01_RS16730 (KAN01_16730)	-	3439480..3440394 (-)	915	WP_006580951.1	DMT family transporter	-
KAN01_RS16735 (KAN01_16735)	rlmB	3440430..3441179 (-)	750	WP_016803977.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
KAN01_RS16740 (KAN01_16740)	-	3441281..3441607 (-)	327	WP_000099685.1	pyrimidine/purine nucleoside phosphorylase	-
KAN01_RS16745 (KAN01_16745)	-	3441684..3442994 (-)	1311	WP_032009950.1	tetratricopeptide repeat protein	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32121.54 Da
• Isoelectric Point: 7.1784

>NTDB_id=355761 KAN01_RS18710 WP_004710834.1 3438025..3438885(+) (pilD) [Acinetobacter nosocomialis strain KAN01]
MQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPRMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACHQP
IRWYQNIPLISWLVLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGPTIQMLFGLVLTWILIALTFIDFDTQLLPDR
FTLPLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=355761 KAN01_RS18710 WP_004710834.1 3438025..3438885(+) (pilD) [Acinetobacter nosocomialis strain KAN01]
ATGCAAGACATCATTGCGTATTTTATTCAAAACTTAACTGCACTTTATATTGCTGTTGCACTCGTGAGCCTATGTATCGG
TAGCTTTCTGAATGTAGTGATTTACCGCACACCAAGAATGATGGAGCAAGATTGGCAGCAAGAATGCCAAATGTTACTCA
ATCCTGAGCAACCCATTATTGATCATGAGAAGCTAACTTTAAGTAAGCCTGCTTCATCATGCCCTGCATGCCATCAACCC
ATCCGTTGGTATCAAAATATCCCACTCATAAGCTGGCTAGTGTTAAGAGGAAAATGTGGTCATTGCCAGCACCCGATTAG
CATTCGCTATCCAGCCATCGAACTACTTACCATGCTATGTTCATTGGTGGTGGTTATGGTGTTTGGTCCAACCATACAAA
TGCTTTTTGGACTCGTCCTCACATGGATATTGATAGCACTTACCTTTATTGATTTCGATACACAATTATTGCCTGATCGC
TTTACCCTACCTTTAGCTGCGCTTGGTTTAGGCATTAACACCTTTAATATCTACACCTCACCCAACTCGGCCATTTGGGG
TTACCTCATTGGTTTTCTATGTCTTTGGATTGTCTATTACTTATTTAAAGTAATTACTGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTACTTGCAGCATTAGGTGCATGGATGGGGCCATTGATGCTGCCGTTAATTGTGTTATTGTCATCGTTA
CTTGGCGCAATCATTGGCATCATTTTATTAAAATTAAGAAATGACAATCAGCCTTTTGCGTTTGGGCCATATATTGCCAT
TGCAGGTTGGGTTGCCTTTTTATGGGGTGATCAGATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Type IV leader peptidase family (Peptidase_A24) (138-247)

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (22-128)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	99.65	100	0.997
pilD	Acinetobacter baumannii D1279779	97.902	100	0.979
pilD	Vibrio cholerae strain A1552	53.309	95.105	0.507
pilD	Vibrio campbellii strain DS40M4	51.661	94.755	0.49
pilD	Neisseria gonorrhoeae MS11	47.727	92.308	0.441