Detailed information    

insolico Bioinformatically predicted

Overview


Name   chpA   Type   Regulator
Locus tag   KAN01_RS03265 Genome accession   NZ_CP038816
Coordinates   668979..673502 (+) Length   1507 a.a.
NCBI ID   WP_032010080.1    Uniprot ID   -
Organism   Acinetobacter nosocomialis strain KAN01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 663979..678502
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KAN01_RS03240 (KAN01_03240) - 664416..665054 (-) 639 WP_032010079.1 hypothetical protein -
  KAN01_RS03245 (KAN01_03245) pilG 665337..665720 (+) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  KAN01_RS03250 (KAN01_03250) - 665747..666109 (+) 363 WP_002051151.1 PleD family two-component system response regulator -
  KAN01_RS03255 (KAN01_03255) - 666167..666703 (+) 537 WP_002051357.1 chemotaxis protein CheW -
  KAN01_RS03260 (KAN01_03260) - 666750..668831 (+) 2082 WP_135924553.1 methyl-accepting chemotaxis protein -
  KAN01_RS03265 (KAN01_03265) chpA 668979..673502 (+) 4524 WP_032010080.1 hybrid sensor histidine kinase/response regulator Regulator
  KAN01_RS03270 (KAN01_03270) - 673499..673966 (+) 468 WP_002051358.1 hypothetical protein -
  KAN01_RS03275 (KAN01_03275) dapE 674216..675349 (-) 1134 WP_032010083.1 succinyl-diaminopimelate desuccinylase -
  KAN01_RS03280 (KAN01_03280) - 675475..675618 (-) 144 WP_002051109.1 entericidin A/B family lipoprotein -
  KAN01_RS03285 (KAN01_03285) - 675731..676624 (-) 894 WP_032010084.1 DUF1853 family protein -
  KAN01_RS03290 (KAN01_03290) - 676729..677097 (+) 369 WP_135924554.1 YbaN family protein -
  KAN01_RS03295 (KAN01_03295) elsL 677247..677750 (+) 504 WP_032010087.1 cell wall-recycling L,D-carboxypeptidase ElsL -

Sequence


Protein


Download         Length: 1507 a.a.        Molecular weight: 171538.10 Da        Isoelectric Point: 4.3443

>NTDB_id=355732 KAN01_RS03265 WP_032010080.1 668979..673502(+) (chpA) [Acinetobacter nosocomialis strain KAN01]
MKEILKTLTEAMTLPEDSYSEQDAEFLEIFVEEIEEIFVDLQPLLNEWMQSENTATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQTLKLTPAIQSYVQLVFKFYFLKLVDNFKQKRAHAVDFRPLILLGQQLQQQQSLEPALEELLQLS
NTLTAETMTGLELDYIEQNSLAEPIVEDVDTEIAINLDETLTLFMEEAEEHLTTIHQFLNQELHQYDSYNALIRALHTLR
GSSAMAQVETIFEASTKVEHLFKILLQEELSSNSDEILLLQEYREFIRDSLELLSKHSSNEQLEARLQQFNQSWDAYVEQ
HGDRTDPLTPSHGLVSQLLLLDVSELLDAELDFEKGIRNEFPDYLERLSEQADLLLQHTHSQAMLGLHEYTSQLKESYDV
LLDKPLLLQSDYIFEIYQKAHQQLIQLFDALAAGQRVGIVKQHQSILEELKLYTLHTPSVHNDLSQQDPASVEPLLNIEP
EPEAAVTVENLSDSADWAVLSQSVQQDRQYISSTQVNQNFDPDLLDIFLEEADELLEGIDTDLNIWVGEQENFAALNNLM
RYLHTLKGGANMVQATYLGSITHELESIYERLIQKQLVATSPLIDFIRLVQDDLADRLQIMREQQLDYAAPYTINALKRA
GQNSNFQPVPMVEVFDSESEIFSEQELISEVLIDEIPAEIEPILAELEVHNDQLVFDNVVTELATPVEAITSVTSQENEA
VVEEQDITAVVEQTFLEEAAELLEMADGLLKQWFEQRTNRSILLQLQRAVHSLKGGARMVGLEAVYAIAYQLENTFEQFA
LHHFNSNIYDHLLESAIAWLKDAIFKHNYQHFDGLQQSLENIQFFETNIQIPAKLTKTDLFSSEPVMTFIQGDGTEPPPM
MGAWEQTERLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLVEMELAIQRLADQLRRMEGELETQIIAK
HGIEHSRYTDFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSHKIRDTESLLLQQSRIQAEIQEGLMRTRLVPFSRLL
PRLQRIVRQTSTALNRPAELFVNNTEGELDRNILERLVTPLEHMLRNAIDHGLEDRAQRQKVNKPEAGRIELNIQRQGTD
VVVVFSDDGQGIDVEKVRQKALLAGLIKPEQDLEEQDILQLIFHPGLSTAEQITQISGRGVGLDVVQSDIKALGGHVSVD
SVYGKGTTFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFESPKELFEYENKRYPLRYLSEFVGNQ
PMPRLNGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQS
TPRHKQLNEAVYRQRESDERRLVMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGF
EVLNLVRHHDMHQYMPIIMITSRTGEKHRERAFSLGVSQYMGKPFQEEELLENIDALLVAFESEVKS

Nucleotide


Download         Length: 4524 bp        

>NTDB_id=355732 KAN01_RS03265 WP_032010080.1 668979..673502(+) (chpA) [Acinetobacter nosocomialis strain KAN01]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGACGCTACCTGAAGATAGCTATTCTGAACAAGATGCTGAGTTTCT
TGAAATCTTCGTTGAAGAAATTGAAGAAATTTTTGTTGATTTGCAACCATTATTAAATGAATGGATGCAGTCTGAGAATA
CTGCTACGCTCACTGAAATTCGCCGCCATTTCCACACTTTAAAAGGTTCTGGAAGAATGATCGGTGCTAAATCTTCAGCT
GAGCTTGCTTGGACAGTTGAAGACACGCTTAATCGCGTAATCAATCAAACCCTTAAATTGACTCCAGCAATCCAGAGCTA
TGTTCAATTAGTATTTAAGTTCTATTTTCTTAAATTAGTAGATAACTTTAAGCAAAAAAGAGCACATGCAGTAGATTTTC
GACCGCTTATTTTATTAGGCCAACAACTACAACAACAGCAAAGTTTAGAACCTGCTTTAGAAGAGCTTTTACAACTTTCA
AATACGCTTACTGCCGAAACAATGACTGGGCTTGAGCTAGACTATATTGAGCAAAACTCATTGGCTGAGCCAATTGTTGA
AGATGTAGATACTGAAATTGCAATAAATCTAGATGAAACTTTGACCTTGTTTATGGAAGAGGCAGAGGAGCATTTAACTA
CAATTCATCAGTTCTTAAATCAAGAGCTGCATCAGTATGATAGTTATAATGCCTTAATACGCGCGCTACATACTTTGCGT
GGCAGTTCTGCGATGGCACAGGTCGAAACAATTTTTGAAGCCAGTACCAAAGTTGAGCACTTATTTAAAATACTGTTGCA
AGAAGAACTTTCTTCTAACTCAGATGAAATTTTATTATTACAAGAATATCGTGAGTTTATTAGAGATAGCTTAGAGCTTC
TATCTAAACATAGTTCAAATGAACAGCTTGAAGCTCGATTGCAGCAGTTTAATCAATCATGGGATGCTTACGTTGAGCAA
CATGGTGACCGAACAGATCCATTAACACCTTCTCATGGTTTGGTATCACAACTATTGTTGTTAGATGTCTCTGAATTGTT
AGATGCAGAATTAGATTTTGAGAAAGGAATTCGTAATGAGTTTCCAGATTATCTTGAACGTCTAAGTGAACAAGCTGATC
TACTGTTACAACATACACATTCTCAAGCAATGCTGGGTTTACATGAATATACCAGTCAATTGAAAGAAAGTTATGATGTA
TTACTTGATAAACCTCTATTATTGCAATCAGACTATATATTTGAAATTTATCAAAAAGCGCATCAACAGCTTATTCAATT
GTTCGATGCCTTGGCTGCTGGTCAGCGAGTTGGTATTGTTAAGCAACATCAAAGTATTCTAGAAGAATTAAAACTTTATA
CCCTACATACTCCGAGCGTACACAATGACCTGTCTCAGCAAGATCCTGCTTCTGTTGAGCCACTACTTAATATCGAACCA
GAGCCAGAAGCTGCTGTTACGGTAGAGAATTTATCAGACTCTGCAGACTGGGCAGTATTAAGCCAGAGTGTACAGCAAGA
TCGCCAATATATTTCCTCTACACAGGTAAATCAAAACTTTGATCCTGACCTTTTAGATATCTTTCTTGAAGAAGCTGATG
AGCTACTTGAGGGAATTGATACCGATCTCAATATTTGGGTAGGTGAGCAAGAAAACTTTGCAGCCCTGAATAATCTAATG
CGCTATTTGCATACCTTGAAAGGTGGAGCAAATATGGTTCAGGCGACTTATCTTGGTTCGATTACCCATGAATTAGAAAG
CATATATGAGCGTTTAATTCAAAAGCAGTTAGTTGCAACTTCACCGTTAATTGATTTTATCCGTTTAGTACAAGATGACT
TGGCTGACCGACTGCAAATCATGCGTGAACAACAATTAGATTATGCAGCTCCTTACACAATTAATGCGTTAAAACGAGCA
GGTCAAAACTCTAACTTCCAACCTGTACCAATGGTTGAAGTATTTGATAGTGAAAGTGAGATCTTCTCTGAACAAGAGCT
GATATCTGAAGTATTAATCGATGAAATACCGGCAGAAATTGAGCCTATTCTTGCAGAATTAGAAGTTCACAATGATCAGC
TGGTATTTGATAACGTTGTTACTGAGTTAGCTACGCCAGTTGAAGCAATAACATCCGTTACATCACAAGAGAATGAAGCG
GTAGTTGAAGAACAGGATATTACGGCTGTTGTTGAGCAGACATTCCTAGAAGAAGCTGCTGAATTGTTAGAAATGGCTGA
TGGGCTATTGAAACAATGGTTTGAGCAGCGTACAAACCGTAGTATCTTGCTTCAATTACAAAGAGCTGTGCACAGTTTGA
AGGGTGGTGCACGAATGGTCGGTTTAGAAGCCGTCTACGCGATTGCCTATCAACTCGAAAATACATTCGAACAATTTGCG
TTGCATCACTTCAACTCGAATATTTATGACCATTTGCTCGAAAGTGCAATTGCATGGCTAAAAGATGCTATTTTCAAGCA
TAACTATCAGCATTTCGATGGATTACAACAAAGTTTAGAAAATATTCAATTCTTTGAAACGAATATCCAAATTCCGGCTA
AGTTAACGAAAACTGATTTGTTTAGCTCAGAACCTGTGATGACTTTCATACAAGGTGATGGTACAGAACCACCACCAATG
ATGGGCGCATGGGAGCAAACAGAACGTCTGGATCAGAACAATGAAATGATCCGTGTTTCAGCAGACTTGATCGAGAAGAT
GATTGACTTGTCTGGTGAGAACTCGATTAACCGTTCACGAATTGAAATGGACTTGAGTCAGTTCGGTCATACATTGGTTG
AAATGGAATTGGCTATTCAACGACTGGCCGATCAGTTACGACGAATGGAAGGCGAGTTAGAAACACAAATTATTGCTAAA
CACGGTATTGAGCATTCTCGCTATACCGACTTTGACCCTTTAGAGATGGACCAATATTCATCTTTAAACCAGTTATCGAA
ATCTCTTGCTGAATCTGCATCGGACTTGGTCGACTTTAAAAATACGTTATCTCACAAGATCAGAGATACAGAAAGTTTAC
TTTTACAACAGTCGCGTATCCAGGCAGAAATTCAAGAAGGCTTGATGCGAACACGATTGGTTCCATTTTCACGTTTGTTA
CCGCGTTTGCAGCGGATTGTGCGTCAAACATCTACAGCCTTGAATAGACCTGCTGAGCTTTTCGTAAATAATACCGAAGG
TGAGTTAGACCGTAACATTTTAGAACGCTTAGTGACACCACTCGAGCATATGCTCAGAAATGCGATTGACCATGGTCTAG
AAGACCGGGCACAGCGCCAAAAGGTGAATAAACCGGAAGCAGGGCGTATTGAACTGAACATTCAGCGTCAAGGAACAGAC
GTTGTTGTTGTCTTTAGTGATGATGGACAAGGTATTGATGTTGAAAAAGTGCGCCAAAAAGCACTGCTTGCTGGTCTGAT
CAAGCCAGAACAAGATTTAGAAGAGCAAGATATTCTACAGCTAATTTTCCATCCAGGTTTAAGTACCGCAGAACAGATTA
CTCAGATTTCTGGACGTGGTGTTGGTCTTGATGTCGTACAGAGCGATATTAAAGCTTTAGGTGGACATGTTAGCGTTGAC
TCTGTTTATGGTAAGGGAACAACATTTACGATACGTGTACCGACTACTGTAGCTGTAAGTGATGCCTTAATGGTAAAAGT
GGCAGATCAGCAATTTGCAATTCCACTTGCTCAAATCGATCGAATTGTTCGAGTTTCGCCAGCTTCTTTAGAGCAGTATT
TTGAAAGCCCTAAAGAACTATTTGAATATGAAAATAAGCGATATCCCTTACGTTATCTTTCTGAATTTGTTGGTAATCAA
CCAATGCCACGACTAAATGGCATGATGTATTCATTACCTGTCTTAATGATTAAAGCCAACAATGGTCAAACTGTGGCGTT
ACTTGTCGATCAGTTAATTGGTTCTCGAGCTCAAATTGTAGTGAAACCAATTGGTCAACAGTTCTCTAGCATTGGGGCAA
TTGCAGGCGCCACGATTTTAGGTGATGGACAGGTTTGTTTAATTTTAGACGGGCAAAATATTGCGCGACAAATTCAGTCT
ACACCGCGTCATAAACAGCTCAATGAAGCAGTATATAGACAACGTGAATCAGACGAGCGCCGTCTCGTTATGATTGTCGA
TGACTCCGTAACTGTACGTAAGGTAACGTCTCGATTACTTGAACGCCAAGGCTACGATGTTGTTACGGCTAAAGATGGCG
TTGATGCCATAGAACAGCTAGAAAATATTAAGCCAGATTTGATGCTGCTTGATATTGAAATGCCACGTATGGATGGTTTC
GAAGTACTTAATCTTGTACGACATCATGATATGCATCAATACATGCCAATTATTATGATTACATCCAGAACAGGCGAAAA
ACATCGTGAACGGGCATTCTCGTTAGGTGTAAGTCAATATATGGGTAAACCGTTCCAAGAAGAAGAGTTACTAGAAAATA
TTGATGCTTTACTTGTAGCGTTTGAAAGCGAGGTCAAATCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

92.9

100

0.929


Multiple sequence alignment