Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | KAN01_RS01680 | Genome accession | NZ_CP038816 |
| Coordinates | 355359..355841 (+) | Length | 160 a.a. |
| NCBI ID | WP_004884685.1 | Uniprot ID | A0A1V0YN91 |
| Organism | Acinetobacter nosocomialis strain KAN01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 350359..360841
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KAN01_RS01675 (KAN01_01675) | - | 352377..355346 (+) | 2970 | Protein_318 | PilC/PilY family type IV pilus protein | - |
| KAN01_RS01680 (KAN01_01680) | pilY2 | 355359..355841 (+) | 483 | WP_004884685.1 | type IV pilin protein | Machinery gene |
| KAN01_RS01685 (KAN01_01685) | pilE | 355838..356263 (+) | 426 | WP_017392607.1 | type IV pilin protein | Machinery gene |
| KAN01_RS01690 (KAN01_01690) | rpsP | 356410..356661 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| KAN01_RS01695 (KAN01_01695) | rimM | 356681..357229 (+) | 549 | WP_004711694.1 | ribosome maturation factor RimM | - |
| KAN01_RS01700 (KAN01_01700) | trmD | 357276..358031 (+) | 756 | WP_002051760.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| KAN01_RS01705 (KAN01_01705) | rplS | 358247..358615 (+) | 369 | WP_002051668.1 | 50S ribosomal protein L19 | - |
| KAN01_RS01710 (KAN01_01710) | - | 358668..359609 (-) | 942 | WP_080593661.1 | lipase family alpha/beta hydrolase | - |
| KAN01_RS01715 (KAN01_01715) | - | 359724..360758 (-) | 1035 | WP_002051740.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17498.71 Da Isoelectric Point: 9.1549
>NTDB_id=355726 KAN01_RS01680 WP_004884685.1 355359..355841(+) (pilY2) [Acinetobacter nosocomialis strain KAN01]
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
MSKYYNLKFNRGFTLIELMVTLLTLAILVAIAVPSYQSYARRATASAAKSEILKLAERLEQHKSRNFTYRGFTTTSVTLT
RGGYTIQITDDTTAGNLLTSSAANGQTWVIRATTTDSRNLNFIAKNSGLRCQSLTATAVDNDCGGTTTCNTCEANSESWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=355726 KAN01_RS01680 WP_004884685.1 355359..355841(+) (pilY2) [Acinetobacter nosocomialis strain KAN01]
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
ATGAGTAAATACTATAATTTGAAGTTCAATCGGGGTTTTACTCTGATTGAACTTATGGTCACTCTTCTTACTTTAGCTAT
TCTTGTTGCTATTGCTGTTCCTTCTTATCAAAGTTATGCCCGTAGAGCTACCGCATCTGCCGCTAAGAGTGAGATTTTAA
AATTAGCTGAGCGATTGGAGCAGCATAAGTCTAGAAATTTTACCTATAGGGGATTTACCACAACCTCTGTAACGTTAACT
CGTGGGGGGTATACGATTCAGATCACTGATGATACGACTGCTGGTAATTTATTAACGAGTTCTGCTGCGAATGGGCAGAC
ATGGGTGATTAGAGCGACTACTACAGATTCCAGAAATCTTAATTTTATTGCTAAAAACTCAGGTTTACGTTGCCAGAGCT
TAACAGCTACTGCTGTTGATAATGATTGTGGTGGAACAACTACATGTAACACATGTGAAGCAAATAGTGAGAGTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
83.75 |
100 |
0.838 |
| comE | Acinetobacter baylyi ADP1 |
37.209 |
100 |
0.4 |