Detailed information NTG0035470

Bioinformatically predicted

Overview

• Name: recA
• Type: Machinery gene
• Locus tag: D11S_RS01260
• Genome accession: NC_013416
• Coordinates: 248662..249720 (-)
• Length: 352 a.a.
• NCBI ID: WP_005544399.1
• Uniprot ID: A0A5D0EHN3
• Organism: Aggregatibacter actinomycetemcomitans D11S-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 243662..254720

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D11S_RS01240 (D11S_0267)	tal	244501..245454 (+)	954	WP_005544407.1	transaldolase	-
D11S_RS01245 (D11S_0268)	tkt	245587..247584 (+)	1998	WP_005574886.1	transketolase	-
D11S_RS01250 (D11S_0269)	-	247656..248045 (-)	390	WP_005568497.1	RidA family protein	-
D11S_RS01255 (D11S_0270)	recX	248122..248580 (-)	459	WP_005548507.1	recombination regulator RecX	-
D11S_RS01260 (D11S_0271)	recA	248662..249720 (-)	1059	WP_005544399.1	recombinase RecA	Machinery gene
D11S_RS01265 (D11S_0272)	-	249868..251793 (-)	1926	WP_005589143.1	ABC transporter ATP-binding protein	-
D11S_RS01270 (D11S_0273)	-	251874..252491 (+)	618	WP_005568493.1	MarC family protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37977.47 Da
• Isoelectric Point: 4.8931

>NTDB_id=35470 D11S_RS01260 WP_005544399.1 248662..249720(-) (recA) [Aggregatibacter actinomycetemcomitans D11S-1]
MATQEEKQKALDAALGQIEKQFGKGAIMKLGDSQKLDIEAISTGSFGLDLALGIGGLPMGRIVEIFGPESSGKTTLTLSV
IAEAQKTGKTCAFIDAEHALDPIYASKLGVDVKELLVSQPDNGEQALEICDALVRSGAVDVIIVDSVAALTPKAEIEGDM
GDSHMGLQARLMSQALRKLTSQIKNANCLVIFINQIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRVGSIKEGDEVIG
NETRVKVVKNKVAPPFRQVDFQILYGEGISKESELIELGVKHKLISKAGAWYAYQNEKIGQGKTNAMKWLKDNPEQAKFI
ESTLRDELLAHPESAITAEVENEAGNGEGDFE

Nucleotide

• Length: 1059 bp

>NTDB_id=35470 D11S_RS01260 WP_005544399.1 248662..249720(-) (recA) [Aggregatibacter actinomycetemcomitans D11S-1]
ATGGCAACTCAAGAAGAAAAGCAAAAAGCACTCGACGCGGCGTTAGGTCAAATTGAAAAACAATTTGGTAAAGGCGCCAT
CATGAAACTCGGCGACAGCCAAAAACTGGACATTGAAGCGATTTCCACCGGTTCTTTCGGTCTTGACCTAGCACTAGGCA
TCGGCGGTTTGCCGATGGGGCGTATCGTGGAGATTTTCGGGCCGGAATCTTCAGGTAAAACTACTTTAACCCTTTCTGTG
ATTGCGGAAGCGCAAAAAACCGGCAAAACCTGTGCCTTTATTGATGCGGAACATGCTTTAGACCCGATTTATGCCTCCAA
ACTCGGCGTGGATGTAAAAGAACTTTTAGTTTCCCAGCCGGACAACGGCGAACAGGCGCTGGAAATTTGTGATGCGTTGG
TGCGTTCCGGTGCGGTGGATGTAATTATCGTTGACTCCGTTGCCGCCTTAACGCCGAAAGCGGAAATTGAAGGCGACATG
GGCGATTCCCACATGGGATTACAAGCGCGTTTAATGTCTCAAGCATTGCGTAAACTTACCAGCCAAATTAAAAACGCCAA
CTGCTTGGTGATTTTCATCAACCAAATTCGGATGAAAATCGGCGTGATGTTCGGTAATCCGGAAACCACCACCGGCGGTA
ACGCGTTGAAATTCTATGCCTCCGTGCGTTTGGATATTCGCCGCGTGGGTTCTATCAAAGAGGGTGATGAAGTTATCGGT
AATGAAACTCGTGTGAAAGTGGTGAAAAACAAAGTGGCGCCACCGTTCCGCCAAGTGGATTTCCAAATTCTGTACGGCGA
AGGTATTTCCAAAGAAAGCGAACTGATTGAGCTCGGCGTGAAACATAAACTCATCAGCAAAGCAGGTGCGTGGTACGCTT
ACCAAAACGAGAAAATCGGTCAGGGCAAAACCAATGCTATGAAATGGTTGAAAGACAATCCTGAACAAGCCAAATTTATC
GAAAGCACCTTGCGTGATGAATTGTTGGCACATCCGGAATCTGCCATCACTGCGGAAGTAGAAAACGAAGCGGGTAATGG
CGAAGGCGATTTCGAATAA

Domains

Predicted by InterproScan.

• recA bacterial DNA recombination protein (RecA) (9-270)

3D structure

• AlphaFold DB: A0A5D0EHN3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recA	Glaesserella parasuis strain SC1401	75	98.864	0.741
recA	Vibrio cholerae strain A1552	75.758	93.75	0.71
recA	Vibrio cholerae O1 biovar El Tor strain E7946	75.758	93.75	0.71
recA	Pseudomonas stutzeri DSM 10701	76.308	92.33	0.705
recA	Neisseria gonorrhoeae strain FA1090	73.292	91.477	0.67
recA	Neisseria gonorrhoeae MS11	73.292	91.477	0.67
recA	Neisseria gonorrhoeae MS11	73.292	91.477	0.67
recA	Acinetobacter baylyi ADP1	69.322	96.307	0.668
recA	Ralstonia pseudosolanacearum GMI1000	70.552	92.614	0.653
recA	Acinetobacter baumannii D1279779	70.769	92.33	0.653
recA	Riemerella anatipestifer ATCC 11845 = DSM 15868	64.264	94.602	0.608
recA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	64.615	92.33	0.597
recA	Helicobacter pylori 26695	62.575	94.886	0.594
recA	Helicobacter pylori strain NCTC11637	62.575	94.886	0.594
recA	Bacillus subtilis subsp. subtilis str. 168	63.354	91.477	0.58
recA	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	60.856	92.898	0.565
recA	Streptococcus mutans UA159	60	92.33	0.554
recA	Streptococcus mitis NCTC 12261	60.185	92.045	0.554
recA	Streptococcus mitis SK321	60.185	92.045	0.554
recA	Streptococcus pneumoniae D39	59.327	92.898	0.551
recA	Streptococcus pneumoniae TIGR4	59.327	92.898	0.551
recA	Streptococcus pneumoniae Rx1	59.327	92.898	0.551
recA	Streptococcus pneumoniae R6	59.327	92.898	0.551
recA	Streptococcus pyogenes NZ131	58.769	92.33	0.543
recA	Latilactobacillus sakei subsp. sakei 23K	60.323	88.068	0.531
recA	Lactococcus lactis subsp. cremoris KW2	56.173	92.045	0.517