Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   BAMTA208_RS00500 Genome accession   NC_017188
Coordinates   97794..98876 (+) Length   360 a.a.
NCBI ID   WP_014469611.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens TA208     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 92794..103876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAMTA208_RS00485 (BAMTA208_00430) - 92794..93885 (+) 1092 WP_013350790.1 protein arginine kinase -
  BAMTA208_RS00490 (BAMTA208_00435) clpC 93882..96317 (+) 2436 WP_013350791.1 ATP-dependent protease ATP-binding subunit ClpC Regulator
  BAMTA208_RS00495 (BAMTA208_00440) radA/sms 96411..97790 (+) 1380 WP_013350792.1 DNA repair protein RadA Machinery gene
  BAMTA208_RS00500 (BAMTA208_00445) disA 97794..98876 (+) 1083 WP_014469611.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  BAMTA208_RS00505 (BAMTA208_00450) - 98990..100090 (+) 1101 WP_013350794.1 PIN/TRAM domain-containing protein -
  BAMTA208_RS00510 (BAMTA208_00455) ispD 100104..100802 (+) 699 WP_014469612.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  BAMTA208_RS00515 (BAMTA208_00460) ispF 100795..101271 (+) 477 WP_013350796.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  BAMTA208_RS00520 (BAMTA208_00465) gltX 101363..102814 (+) 1452 WP_014469613.1 glutamate--tRNA ligase -
  BAMTA208_RS00525 (BAMTA208_00470) cysE 103125..103778 (+) 654 WP_003156410.1 serine O-acetyltransferase -

Sequence


Protein


Download         Length: 360 a.a.        Molecular weight: 40643.16 Da        Isoelectric Point: 5.5321

>NTDB_id=35471 BAMTA208_RS00500 WP_014469611.1 97794..98876(+) (disA) [Bacillus amyloliquefaciens TA208]
MEKEKKGAKQELDLSAILQFVAPGTPLRAGIENVLRANTGGLIVVGYNDKVKQVVDGGFHINTSFAPAHLYELAKMDGAI
ILSDSGQKILYANTQLMPEATISSSETGMRHRTAERVAKQTGCLVIAISERRNVITLYQDSMKYTLKDIGFILTKANQAI
QTLEKYKTILDKTITALNALEFEELVTFSDVLSVMHRYEMVLRIKNEINMYIKELGTEGHLIRLQVIELITDMEEEAALF
IKDYVKEKIKDPFVLLKELQDMSSYDLLDDSILFKLLGYPASTNLDDYVLPRGYRLLNKIPRLPMPIVENVVEAFGFLPS
ITEATAEELDDVEGIGEVRAQKIKKGLKRLQEKHYIDRQL

Nucleotide


Download         Length: 1083 bp        

>NTDB_id=35471 BAMTA208_RS00500 WP_014469611.1 97794..98876(+) (disA) [Bacillus amyloliquefaciens TA208]
ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAATCCTGCAGTTCGTTGCACCGGGAACCCCGCT
CAGAGCCGGGATAGAAAATGTACTTCGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAACGATAAGGTAAAACAAG
TCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGCCCGCTCACTTATACGAGCTGGCCAAAATGGACGGAGCCATT
ATTTTAAGTGATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAGGCGACCATTTCTTCTTCAGAAAC
GGGAATGAGGCACCGTACAGCGGAACGGGTGGCAAAGCAGACCGGCTGTCTCGTCATAGCCATTTCTGAACGCAGAAATG
TCATTACGTTATACCAGGACAGCATGAAGTACACACTAAAGGACATAGGCTTTATTTTAACAAAGGCTAACCAGGCCATT
CAAACGCTTGAGAAGTATAAAACCATTCTAGACAAAACGATTACAGCTTTAAACGCCTTAGAATTTGAGGAGCTTGTGAC
ATTCAGTGACGTGCTGTCCGTCATGCACCGGTATGAAATGGTGCTCCGTATAAAAAATGAAATCAACATGTATATTAAAG
AACTCGGAACGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGATATGGAAGAAGAAGCGGCTCTTTTC
ATCAAAGACTATGTAAAAGAAAAAATCAAAGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGATCT
GCTTGATGATTCCATTTTGTTTAAGCTGCTTGGATATCCCGCTTCTACCAATCTCGATGATTATGTTCTGCCGAGAGGAT
ACAGGCTGCTGAACAAAATTCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCATTCGGATTTTTGCCAAGC
ATAACGGAAGCGACAGCCGAAGAACTGGATGATGTTGAAGGTATCGGCGAGGTGCGCGCCCAAAAAATCAAAAAAGGCTT
AAAACGCCTCCAAGAAAAACACTATATAGATAGACAGCTTTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

94.722

100

0.947


Multiple sequence alignment