Detailed information
Bioinformatically predicted
Overview
| Name | letA | Type | Regulator |
| Locus tag | GPW86_RS18200 | Genome accession | NZ_CP046742 |
| Coordinates | 2658818..2659462 (+) | Length | 214 a.a. |
| NCBI ID | WP_001890391.1 | Uniprot ID | Q9KSP3 |
| Organism | Vibrio cholerae strain 3523-03 | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2653818..2664462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GPW86_RS18190 | - | 2654008..2656107 (+) | 2100 | WP_184476229.1 | PTS sugar transporter subunit IIC/EAL domain-containing protein | - |
| GPW86_RS18195 | - | 2656079..2658442 (-) | 2364 | WP_123011445.1 | DNA polymerase II | - |
| GPW86_RS18200 | letA | 2658818..2659462 (+) | 645 | WP_001890391.1 | UvrY/SirA/GacA family response regulator transcription factor | Regulator |
| GPW86_RS18205 | uvrC | 2659462..2661294 (+) | 1833 | WP_001884660.1 | excinuclease ABC subunit UvrC | - |
| GPW86_RS18210 | pgsA | 2661342..2661899 (+) | 558 | WP_001211977.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| GPW86_RS18235 | - | 2662792..2663910 (+) | 1119 | WP_069647937.1 | GGDEF domain-containing protein | - |
| GPW86_RS18240 | - | 2663907..2664392 (-) | 486 | WP_123011446.1 | GNAT family N-acetyltransferase | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 23751.50 Da Isoelectric Point: 6.4970
>NTDB_id=354635 GPW86_RS18200 WP_001890391.1 2658818..2659462(+) (letA) [Vibrio cholerae strain 3523-03]
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
MISVFLVDDHELVRTGIRRIIEDVRGMKVAGEADSGEEAVKWCRTNHADVILMDMNMPGIGGLEATKKLLRVNPDIKIIV
LTVHTENPFPTKVMQAGAAGYLTKGAAPDEMVNAIRIVHSGQRYISPEIAQQMALSQFSPASENPFADLSERELQIMLMI
TKGQKVTDISEQLSLSPKTVNSYRYRLFAKLNINGDVELTHLAIRHGILDTEKL
Nucleotide
Download Length: 645 bp
>NTDB_id=354635 GPW86_RS18200 WP_001890391.1 2658818..2659462(+) (letA) [Vibrio cholerae strain 3523-03]
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGCATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
TTGATTAGTGTTTTCCTTGTAGATGATCACGAGCTGGTTCGCACAGGGATACGACGTATTATTGAAGACGTCCGTGGAAT
GAAAGTAGCAGGGGAAGCTGACAGCGGTGAAGAAGCAGTAAAATGGTGCCGTACTAACCATGCGGATGTCATTTTAATGG
ATATGAACATGCCGGGTATTGGTGGCTTGGAAGCAACCAAGAAGCTGTTGCGTGTTAATCCGGACATTAAAATTATCGTA
TTGACGGTACATACCGAAAATCCGTTCCCAACCAAAGTGATGCAAGCGGGTGCCGCAGGTTATCTCACGAAGGGCGCGGC
ACCGGATGAAATGGTCAATGCGATCCGCATCGTTCACAGCGGTCAGCGTTACATTTCTCCAGAAATTGCGCAGCAAATGG
CGTTGAGTCAGTTTTCGCCCGCCTCTGAAAATCCTTTTGCTGATCTCTCCGAGCGTGAATTGCAGATCATGTTAATGATC
ACCAAAGGCCAGAAGGTGACGGACATTTCCGAACAGCTCAGTTTGAGCCCGAAAACCGTCAACAGCTACCGCTACCGTTT
GTTCGCCAAGCTGAATATCAACGGTGATGTGGAATTAACCCACTTAGCTATCCGACACGGGATCTTAGATACTGAGAAGT
TATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| letA | Legionella pneumophila str. Paris |
51.905 |
98.131 |
0.509 |
| letA | Legionella pneumophila strain ERS1305867 |
51.905 |
98.131 |
0.509 |