Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   SaO322_RS06150 Genome accession   NZ_CP038460
Coordinates   1212531..1213403 (+) Length   290 a.a.
NCBI ID   WP_162887996.1    Uniprot ID   -
Organism   Staphylococcus aureus strain B119     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 1207531..1218403
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO322_RS06125 (SaO322_01134) - 1207678..1208445 (+) 768 WP_000176392.1 ribonuclease HII -
  SaO322_RS06130 (SaO322_01135) sucC 1208554..1209720 (+) 1167 WP_001020804.1 ADP-forming succinate--CoA ligase subunit beta -
  SaO322_RS06135 (SaO322_01136) sucD 1209742..1210650 (+) 909 WP_000110253.1 succinate--CoA ligase subunit alpha -
  SaO322_RS14495 - 1210876..1210931 (+) 56 Protein_1155 YSIRK-type signal peptide-containing protein -
  SaO322_RS06140 (SaO322_01137) - 1210936..1211088 (+) 153 Protein_1156 cell wall hydrolase -
  SaO322_RS06145 (SaO322_01138) fmhC 1211116..1212360 (+) 1245 WP_000672856.1 FemA/FemB family glycyltransferase FmhC -
  SaO322_RS06150 (SaO322_01139) dprA 1212531..1213403 (+) 873 WP_162887996.1 DNA-processing protein DprA Machinery gene
  SaO322_RS06155 (SaO322_01140) topA 1213577..1215652 (+) 2076 WP_118848096.1 type I DNA topoisomerase -
  SaO322_RS06160 (SaO322_01141) trmFO 1215808..1217115 (+) 1308 WP_000195254.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -

Sequence

Protein


Download         Length: 290 a.a.        Molecular weight: 33564.99 Da        Isoelectric Point: 9.6076

>NTDB_id=354525 SaO322_RS06150 WP_162887996.1 1212531..1213403(+) (dprA) [Staphylococcus aureus strain B119]
MIRLFLLKLYWAHFSTKQIHQFLMAYPNVIKEGGRKKDSYLCEWVNREENVHLLRKYYAFIKLDHNDIIKELQKLKVSYI
TYMDTEYPVLLKEIYQFPLLLFYKGNIKLINNMHHLAVVGTRDSTSYTQQSLEFLLSNDKSKYLTIVSGLAQGADAMAHQ
IALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVISEYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHI
TIDFALEQNRNVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI

Nucleotide


Download         Length: 873 bp        

>NTDB_id=354525 SaO322_RS06150 WP_162887996.1 1212531..1213403(+) (dprA) [Staphylococcus aureus strain B119]
TTGATTAGACTATTTTTGCTTAAGTTATACTGGGCACACTTTTCGACTAAACAAATTCATCAATTTTTAATGGCATATCC
TAATGTAATTAAAGAGGGGGGCAGAAAAAAAGATAGTTATTTATGTGAATGGGTGAATAGGGAAGAAAATGTTCATTTAT
TACGTAAATACTATGCTTTTATAAAACTTGATCATAACGACATTATTAAAGAACTGCAGAAATTAAAAGTAAGTTACATT
ACATATATGGATACTGAATACCCAGTGCTATTAAAAGAAATATATCAATTTCCATTACTTCTTTTCTATAAAGGGAACAT
CAAATTAATAAATAATATGCATCATTTGGCAGTAGTAGGTACAAGAGATTCTACGAGTTATACCCAACAGTCTTTAGAAT
TTTTATTATCAAATGATAAAAGCAAATATTTAACAATTGTTTCCGGCCTTGCTCAAGGAGCTGATGCAATGGCACATCAA
ATAGCTTTAAAATACAATCTCCCTACAATAGCAGTTTTAGCCTTTGGCCATCAAACACATTATCCCAAAAGTACATTAGC
ATTAAGAAATAAAATAGAAGAAAAAGGTTTAGTTATATCCGAATATCCGCCACATACACCAATTGCTAAATATAGATTTC
CTGAGCGTAATAGAATTATCAGCGGTTTGTCAAAAGGGGTTTTAATTACTGAGGCTAAGGAACAAAGTGGCAGTCACATC
ACGATAGATTTTGCATTAGAGCAAAATAGAAATGTTTATGTTTTACCTGGATCTATGTTTAATCCTATGACAAAAGGTAA
TTTATTACGTATCCAAGAAGGAGCTAAGGTAGTATTAAACGCTAATGATATATTTGAAGACTACTATATTTAA

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(72-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Staphylococcus aureus MW2

98.621

100

0.986
  dprA Staphylococcus aureus N315

98.276

100

0.983

Multiple sequence alignment