Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   GO596_RS05490 Genome accession   NZ_CP046628
Coordinates   1094138..1095490 (+) Length   450 a.a.
NCBI ID   WP_024343735.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1089138..1100490
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS05460 (GO596_05460) - 1089532..1090140 (+) 609 WP_021142851.1 TVP38/TMEM64 family protein -
  GO596_RS05465 (GO596_05465) - 1090172..1090819 (-) 648 WP_004232801.1 amino acid ABC transporter permease -
  GO596_RS05470 (GO596_05470) - 1090829..1091533 (-) 705 WP_004232799.1 amino acid ABC transporter permease -
  GO596_RS05475 (GO596_05475) - 1091549..1092358 (-) 810 WP_157339347.1 transporter substrate-binding domain-containing protein -
  GO596_RS05480 (GO596_05480) - 1092363..1093127 (-) 765 WP_024343734.1 amino acid ABC transporter ATP-binding protein -
  GO596_RS05485 (GO596_05485) yycF 1093435..1094145 (+) 711 WP_021142846.1 response regulator YycF -
  GO596_RS05490 (GO596_05490) vicK 1094138..1095490 (+) 1353 WP_024343735.1 cell wall metabolism sensor histidine kinase VicK Regulator
  GO596_RS05495 (GO596_05495) vicX 1095491..1096300 (+) 810 WP_157339348.1 MBL fold metallo-hydrolase Regulator
  GO596_RS05505 (GO596_05505) - 1096676..1096990 (+) 315 WP_000420682.1 YdcP family protein -
  GO596_RS05510 (GO596_05510) - 1097006..1097392 (+) 387 WP_157339349.1 YdcP family protein -
  GO596_RS05515 (GO596_05515) - 1097421..1098806 (+) 1386 WP_000813488.1 FtsK/SpoIIIE domain-containing protein -
  GO596_RS05520 (GO596_05520) - 1098809..1098961 (+) 153 WP_000879507.1 hypothetical protein -
  GO596_RS05525 (GO596_05525) mobT 1098984..1100189 (+) 1206 WP_000398284.1 MobT family relaxase -
  GO596_RS05530 (GO596_05530) - 1100232..1100453 (+) 222 WP_001009056.1 hypothetical protein -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51391.34 Da        Isoelectric Point: 4.7300

>NTDB_id=354002 GO596_RS05490 WP_024343735.1 1094138..1095490(+) (vicK) [Streptococcus equinus strain CNU 77-23]
MNNIMSQNQYLFEQAILFLLAFVAVYFIHLAIRDYRTSVNIRRLSGKVRELITGKYTEDIIIEKDRDLAELAGQLNDLST
VFRLAQENLAQEKNRLASILSYMTDGVLATDRSGNITMINQTAQQQLNLEREEALGMNIVDILGDDSDYTYHDLVSKTPE
IVLNRRDETGEFITLRIRFALNRRDSGFISGLIAVLHDTTEQEKEDRERRLFVSNVSHELRTPLTSVKSYLEALDEGALK
EDIAPSFIKVSLDETNRMIRMISDLLNLSRIDNQTVQLEVEMTNFTAFMTSILNRFDQIKSQHTVAGKQYEIVRDYPIKS
IWLEIDPDKMTQVLDNILNNAIKYSPDGGKITVSMKTTETQLIISISDEGLGIPKKDLPLIFDRFYRVDKARSRAQGGSG
LGLAIAKEIVKQHKGFIWAQSTYGKGSTFTIVLPYEKDSDIYDEWEDDED

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=354002 GO596_RS05490 WP_024343735.1 1094138..1095490(+) (vicK) [Streptococcus equinus strain CNU 77-23]
ATGAATAATATAATGTCACAGAATCAGTATCTGTTTGAGCAGGCAATCTTGTTTTTGCTCGCTTTTGTCGCTGTTTACTT
TATTCATTTAGCGATAAGAGATTATCGAACTTCAGTTAATATTCGTCGTTTGAGTGGTAAGGTTCGTGAGCTTATCACTG
GTAAATATACTGAAGATATCATTATCGAAAAAGATAGAGATTTGGCTGAACTTGCTGGTCAGTTAAATGACTTGTCAACG
GTTTTTCGCTTGGCTCAGGAAAATCTTGCGCAGGAAAAAAATCGTTTGGCTAGTATTTTGTCTTACATGACTGATGGTGT
CTTGGCTACTGACCGTTCTGGAAATATCACCATGATTAACCAGACAGCTCAGCAGCAACTTAATCTGGAACGCGAAGAAG
CTCTTGGAATGAATATTGTTGATATTCTTGGGGACGATAGCGATTATACCTACCATGATTTGGTTTCTAAGACACCTGAG
ATTGTTCTAAATCGCCGTGATGAGACAGGTGAATTTATCACTTTGCGAATTCGTTTTGCGCTAAATCGTCGTGATAGTGG
CTTTATCTCAGGGTTGATTGCTGTTTTACATGATACAACGGAACAGGAAAAAGAAGACCGAGAACGTCGTTTATTCGTAT
CAAATGTTAGTCACGAATTGCGTACACCGTTGACATCTGTGAAATCATATTTGGAAGCTTTGGATGAAGGTGCCCTTAAA
GAAGATATTGCACCAAGTTTTATTAAAGTTTCTCTTGATGAAACAAACCGCATGATTCGAATGATTTCTGATTTGCTCAA
TTTGTCTCGAATTGATAATCAGACTGTTCAGCTTGAAGTTGAAATGACTAACTTTACAGCATTTATGACATCAATTTTGA
ACCGTTTTGACCAAATTAAGAGTCAACATACTGTCGCTGGTAAGCAGTACGAGATTGTCAGAGATTATCCAATCAAATCT
ATCTGGTTAGAAATTGACCCAGATAAAATGACGCAAGTTCTGGATAATATCCTTAATAATGCAATTAAGTATTCGCCAGA
TGGTGGTAAAATCACTGTCAGCATGAAGACGACTGAGACACAGTTGATTATTTCAATTTCTGATGAAGGTCTTGGTATTC
CTAAGAAAGATTTGCCACTAATCTTTGACCGATTCTATCGTGTTGACAAGGCTAGAAGTCGTGCTCAAGGTGGTTCAGGA
CTTGGTCTTGCGATTGCAAAAGAAATTGTTAAACAACACAAAGGATTTATTTGGGCTCAAAGTACTTATGGAAAAGGCTC
AACCTTTACAATTGTTCTTCCGTATGAGAAGGATTCTGATATTTATGACGAATGGGAGGATGACGAGGACTAG

Domains

Predicted by InterProScan.

PAS fold (PAS)

(95-189)

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

76.867

92.222

0.709
  micB Streptococcus pneumoniae Cp1015

66.038

94.222

0.622