Detailed information NTG0353972

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GO596_RS03245
• Genome accession: NZ_CP046628
• Coordinates: 633326..634420 (-)
• Length: 364 a.a.
• NCBI ID: WP_074451157.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain CNU 77-23
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 628326..639420

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO596_RS03230 (GO596_03230)	trpS	629419..630441 (+)	1023	WP_004233676.1	tryptophan--tRNA ligase	-
GO596_RS03235 (GO596_03235)	guaB	630669..632150 (+)	1482	WP_021143381.1	IMP dehydrogenase	-
GO596_RS03240 (GO596_03240)	-	632393..633259 (+)	867	WP_024344473.1	GRP family sugar transporter	-
GO596_RS03245 (GO596_03245)	recF	633326..634420 (-)	1095	WP_074451157.1	DNA replication/repair protein RecF	Machinery gene
GO596_RS03250 (GO596_03250)	yaaA	634423..634806 (-)	384	WP_021143377.1	S4 domain-containing protein YaaA	-
GO596_RS03255 (GO596_03255)	yfmF	634893..636137 (+)	1245	WP_033153614.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GO596_RS03260 (GO596_03260)	yfmH	636138..637427 (+)	1290	WP_157339189.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GO596_RS03265 (GO596_03265)	-	637494..638423 (+)	930	WP_074639567.1	helix-turn-helix domain-containing protein	-
GO596_RS03270 (GO596_03270)	pgsA	638433..638987 (+)	555	WP_004233663.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-

Sequence

Protein

• Length: 364 a.a.
• Molecular weight: 42046.41 Da
• Isoelectric Point: 8.8863

>NTDB_id=353972 GO596_RS03245 WP_074451157.1 633326..634420(-) (recF) [Streptococcus equinus strain CNU 77-23]
MWIQKIALKNYRNYLNNELEFSPGLNVFIGKNAQGKTNFLEAIYFLSLTRSHRTRLDKELIHFQEKELRVSGNLQRSTGV
VPLEIDLSSKGRVTKINHLKQAKLSDYIGVMTVVLFAPEDLQLIKGAPSLRRKFIDIDLGQIKPVYLSDLSNYNHVLKQR
NTYLKTAEKVDIDFLAVLDEQLADFGSRVMEHRLDFIANLEKEADRYHYTISDGLEHLKIHYLSSVPFDKKSDIKEQFLK
TLEKNHKRDIFKKNTGAGPHRDDLEFFINDMPANFGSQGQHRSLILSLKMAEIELIKNVTGDYPILLLDDVMSELDNYRQ
TELLKMIIAKNVQTFITTTSLEHLSQLPKELKIFTVTKGHIQEN

Nucleotide

• Length: 1095 bp

>NTDB_id=353972 GO596_RS03245 WP_074451157.1 633326..634420(-) (recF) [Streptococcus equinus strain CNU 77-23]
ATGTGGATTCAAAAAATAGCCTTAAAAAATTACCGTAATTATTTAAATAATGAACTTGAATTTTCCCCTGGACTCAATGT
TTTTATTGGGAAAAATGCCCAAGGAAAAACTAATTTCTTAGAAGCTATTTATTTCTTATCTTTAACTCGCAGCCACCGTA
CACGCTTAGACAAAGAGCTGATTCATTTTCAAGAAAAAGAACTCCGCGTCTCAGGTAATTTACAACGCTCAACTGGGGTA
GTTCCTCTAGAGATTGACCTTTCAAGCAAAGGGCGTGTTACCAAAATCAATCACTTAAAACAAGCTAAATTATCTGATTA
CATTGGTGTAATGACTGTTGTTCTTTTTGCTCCCGAGGATTTGCAACTCATAAAAGGGGCACCAAGTCTTCGTCGCAAAT
TTATCGATATCGACCTTGGACAAATCAAGCCAGTTTACTTATCTGATTTATCGAATTACAACCATGTCCTTAAACAGCGT
AATACCTACCTTAAAACGGCTGAAAAAGTCGATATTGACTTTCTAGCAGTACTTGATGAACAGCTAGCTGACTTTGGTAG
CCGTGTTATGGAGCACCGTCTAGATTTTATTGCTAATTTAGAAAAAGAAGCTGATCGCTACCACTACACCATTTCTGATG
GCTTAGAACATTTGAAAATTCACTATTTATCATCTGTACCTTTTGATAAAAAATCTGATATCAAAGAACAATTTTTAAAG
ACTTTAGAAAAAAATCACAAACGTGATATTTTCAAAAAAAATACTGGTGCTGGTCCACACCGTGATGATTTAGAATTTTT
CATCAATGATATGCCCGCTAATTTTGGGAGTCAAGGTCAGCATCGTAGCCTAATTCTATCACTAAAAATGGCTGAAATTG
AGCTCATCAAAAATGTTACGGGCGATTATCCGATTTTACTTCTCGACGATGTTATGAGTGAGTTAGATAATTACAGACAA
ACTGAGCTACTGAAAATGATTATCGCTAAAAATGTTCAGACTTTCATCACAACAACAAGTCTTGAACATTTATCACAACT
CCCCAAAGAATTAAAAATTTTTACTGTTACCAAAGGACATATTCAAGAGAACTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-360)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	64.286	100	0.643
recF	Bacillus subtilis subsp. subtilis str. 168	45.38	100	0.459