Detailed information NTG0353825

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: GO602_RS00100
• Genome accession: NZ_CP046602
• Coordinates: 21728..22753 (+)
• Length: 341 a.a.
• NCBI ID: WP_124181424.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain CMC-115
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 16728..27753

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO602_RS00075 (GO602_00075)	-	16916..17233 (-)	318	WP_024918147.1	tetratricopeptide repeat protein	-
GO602_RS00080 (GO602_00080)	trkA	17382..18755 (-)	1374	WP_003107053.1	Trk system potassium transporter TrkA	-
GO602_RS00085 (GO602_00085)	rsmB	18783..20087 (-)	1305	WP_024918146.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
GO602_RS00090 (GO602_00090)	fmt	20084..21028 (-)	945	WP_024918145.1	methionyl-tRNA formyltransferase	-
GO602_RS00095 (GO602_00095)	def	21083..21589 (-)	507	WP_003097293.1	peptide deformylase	-
GO602_RS00100 (GO602_00100)	tsaP	21728..22753 (+)	1026	WP_124181424.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
GO602_RS00105 (GO602_00105)	dprA	22888..23973 (+)	1086	WP_124181423.1	DNA-processing protein DprA	Machinery gene
GO602_RS00110 (GO602_00110)	-	24014..24571 (+)	558	WP_024918142.1	L-threonylcarbamoyladenylate synthase	-
GO602_RS00115 (GO602_00115)	-	24581..25558 (-)	978	WP_168334225.1	NADPH:quinone reductase	-
GO602_RS00120 (GO602_00120)	hemF	25749..26666 (+)	918	WP_124181422.1	oxygen-dependent coproporphyrinogen oxidase	-
GO602_RS00125 (GO602_00125)	aroE	26724..27548 (+)	825	WP_024918139.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37541.95 Da
• Isoelectric Point: 9.3358

>NTDB_id=353825 GO602_RS00100 WP_124181424.1 21728..22753(+) (tsaP) [Pseudomonas aeruginosa strain CMC-115]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGAGDRVYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=353825 GO602_RS00100 WP_124181424.1 21728..22753(+) (tsaP) [Pseudomonas aeruginosa strain CMC-115]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGTCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAAATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGTGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGTGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCGCCGGCGACCGAGTCTACGCC
CGCGGCAAGTTCGCTGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCTAAGACCAAGGA
AGTCCTCGGCATCAACGCCGATGACATCGGCGGCGGCGAGGTGGTGGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACGACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTTGGCGAGACGGTGCGCG
ACCGCGTTACCGGCGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.24	100	0.39