Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GO004_RS16075 Genome accession   NZ_CP046591
Coordinates   3091547..3091921 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain R31     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3086547..3096921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO004_RS16055 (GO004_16055) acdA 3087083..3088222 (+) 1140 WP_015251002.1 acyl-CoA dehydrogenase AcdA -
  GO004_RS16060 (GO004_16060) rpoE 3088405..3088929 (+) 525 WP_128441915.1 DNA-directed RNA polymerase subunit delta -
  GO004_RS16065 (GO004_16065) pyrG 3089171..3090778 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  GO004_RS16070 (GO004_16070) ywjG 3090860..3091381 (-) 522 WP_014481199.1 DUF2529 domain-containing protein -
  GO004_RS16075 (GO004_16075) letA 3091547..3091921 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  GO004_RS16080 (GO004_16080) fbaA 3092102..3092959 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  GO004_RS16085 (GO004_16085) fsa 3093079..3093717 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  GO004_RS16090 (GO004_16090) murAB 3094096..3095385 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GO004_RS16095 (GO004_16095) glpX 3095416..3096381 (+) 966 WP_014481197.1 class II fructose-bisphosphatase -
  GO004_RS16100 (GO004_16100) - 3096596..3096757 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=353636 GO004_RS16075 WP_003227621.1 3091547..3091921(+) (letA) [Bacillus subtilis strain R31]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=353636 GO004_RS16075 WP_003227621.1 3091547..3091921(+) (letA) [Bacillus subtilis strain R31]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363