Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GOQ08_RS18090 Genome accession   NZ_CP046549
Coordinates   3764083..3764718 (+) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain 19WIARLN022_full     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3759083..3769718
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOQ08_RS18070 (GOQ08_17920) - 3759162..3759977 (+) 816 WP_000011167.1 DsbC family protein -
  GOQ08_RS18075 (GOQ08_17925) - 3760222..3761523 (+) 1302 WP_000805827.1 homoserine dehydrogenase -
  GOQ08_RS18080 (GOQ08_17930) thrC 3761579..3762718 (+) 1140 WP_000063596.1 threonine synthase -
  GOQ08_RS18085 (GOQ08_17935) pbpG 3762824..3763870 (-) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  GOQ08_RS18090 (GOQ08_17940) letA 3764083..3764718 (+) 636 WP_000633799.1 response regulator Regulator
  GOQ08_RS18095 (GOQ08_17945) pilS 3764729..3766297 (+) 1569 WP_001160346.1 PAS domain-containing sensor histidine kinase Regulator
  GOQ08_RS18100 (GOQ08_17950) - 3766321..3767742 (+) 1422 WP_000840554.1 sigma-54 dependent transcriptional regulator -
  GOQ08_RS18105 (GOQ08_17955) - 3767746..3768930 (-) 1185 WP_000939104.1 S41 family peptidase -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=353363 GOQ08_RS18090 WP_000633799.1 3764083..3764718(+) (letA) [Acinetobacter baumannii strain 19WIARLN022_full]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=353363 GOQ08_RS18090 WP_000633799.1 3764083..3764718(+) (letA) [Acinetobacter baumannii strain 19WIARLN022_full]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTTGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGTGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55