Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GOD87_RS00960 Genome accession   NZ_CP046536
Coordinates   202243..202878 (-) Length   211 a.a.
NCBI ID   WP_057093969.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain XL380     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 197243..207878
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOD87_RS00945 (GOD87_00945) - 198030..199214 (+) 1185 WP_000939107.1 S41 family peptidase -
  GOD87_RS00950 (GOD87_00950) - 199218..200639 (-) 1422 WP_057093973.1 sigma-54-dependent transcriptional regulator -
  GOD87_RS00955 (GOD87_00955) pilS 200664..202232 (-) 1569 WP_057093971.1 sensor histidine kinase Regulator
  GOD87_RS00960 (GOD87_00960) letA 202243..202878 (-) 636 WP_057093969.1 response regulator Regulator
  GOD87_RS00965 (GOD87_00965) pbpG 203091..204137 (+) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  GOD87_RS00970 (GOD87_00970) thrC 204244..205383 (-) 1140 WP_000063593.1 threonine synthase -
  GOD87_RS00975 (GOD87_00975) - 205439..206740 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  GOD87_RS00980 (GOD87_00980) - 206985..207800 (-) 816 WP_057093967.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23177.81 Da        Isoelectric Point: 5.0959

>NTDB_id=353065 GOD87_RS00960 WP_057093969.1 202243..202878(-) (letA) [Acinetobacter baumannii strain XL380]
MITVLVVDDHELVRTGICRMLEDHTDVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=353065 GOD87_RS00960 WP_057093969.1 202243..202878(-) (letA) [Acinetobacter baumannii strain XL380]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATACCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCCGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, luxR family (GerE)

(147-203)

Response regulator receiver domain (Response_reg)

(4-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55