Detailed information    

insolico Bioinformatically predicted

Overview


Name   comK/comK1   Type   Regulator
Locus tag   SaO408_RS05115 Genome accession   NZ_CP038270
Coordinates   1017342..1017911 (-) Length   189 a.a.
NCBI ID   WP_000287265.1    Uniprot ID   A0A7U7EXU5
Organism   Staphylococcus aureus strain O408 isolate B115     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 1012342..1022911
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO408_RS05095 (SaO408_0955) - 1013845..1015203 (+) 1359 WP_000021872.1 TrkH family potassium uptake protein -
  SaO408_RS05100 (SaO408_0956) - 1015342..1016853 (+) 1512 WP_000414178.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  SaO408_RS05115 (SaO408_0959) comK/comK1 1017342..1017911 (-) 570 WP_000287265.1 competence protein ComK Regulator
  SaO408_RS05120 (SaO408_0960) - 1018121..1018339 (+) 219 WP_000876829.1 IDEAL domain-containing protein -
  SaO408_RS05125 (SaO408_0961) - 1018420..1019406 (-) 987 WP_000668812.1 lipoate--protein ligase -
  SaO408_RS05130 (SaO408_0962) - 1019605..1019781 (+) 177 WP_000214898.1 YkvS family protein -
  SaO408_RS05135 (SaO408_0963) - 1019796..1020398 (+) 603 WP_001033867.1 CPBP family glutamic-type intramembrane protease -
  SaO408_RS14390 - 1020715..1020777 (+) 63 WP_228764722.1 hypothetical protein -
  SaO408_RS05145 - 1021316..1021414 (+) 99 Protein_962 hypothetical protein -
  SaO408_RS05150 (SaO408_0964) - 1021427..1021699 (+) 273 WP_029656317.1 lactococcin 972 family bacteriocin -

Sequence


Protein


Download         Length: 189 a.a.        Molecular weight: 22601.83 Da        Isoelectric Point: 9.6091

>NTDB_id=352997 SaO408_RS05115 WP_000287265.1 1017342..1017911(-) (comK/comK1) [Staphylococcus aureus strain O408 isolate B115]
MYSQNIYVIRKGDMVIRPAFDDDDQRNGSEIIRFDKTRIQNPFKVQKIIERSCKFYGNTYLGKKAETNRITGISSKPPIL
LTPLFPTYFFPTHSDRQNENIWLNMHYIESIKELKNRKCKVTFINNESIILHVSYHSLWHQYNNSIFYYYMVDKQSRMIS
KNPDQPIDYNKATLNVFEALTRYSLFEDK

Nucleotide


Download         Length: 570 bp        

>NTDB_id=352997 SaO408_RS05115 WP_000287265.1 1017342..1017911(-) (comK/comK1) [Staphylococcus aureus strain O408 isolate B115]
ATGTATTCTCAAAATATTTATGTGATACGCAAAGGAGACATGGTTATTCGACCAGCATTTGATGATGACGATCAAAGAAA
CGGTAGTGAAATAATTCGGTTTGACAAAACGCGTATTCAAAATCCTTTTAAAGTCCAGAAAATCATTGAACGCTCTTGCA
AATTTTATGGTAATACTTATCTTGGCAAGAAAGCAGAGACAAACCGCATTACTGGCATTTCTAGTAAACCACCTATTTTA
CTAACACCATTATTTCCAACTTATTTTTTCCCAACACATTCTGACAGACAAAATGAAAATATTTGGTTAAATATGCATTA
TATCGAAAGTATTAAAGAATTAAAAAATCGTAAATGTAAAGTGACATTTATTAATAATGAATCAATCATTCTTCATGTTT
CATACCACAGTTTATGGCATCAATATAACAATTCCATTTTTTACTATTATATGGTAGATAAACAATCTCGCATGATATCA
AAAAATCCCGACCAACCAATAGATTATAATAAAGCCACATTGAATGTGTTTGAAGCATTGACACGCTATTCTTTATTTGA
AGATAAATAA

Domains


Predicted by InterproScan.

(5-156)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7U7EXU5

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comK/comK1 Staphylococcus aureus MW2

100

100

1

  comK/comK1 Staphylococcus aureus N315

100

100

1


Multiple sequence alignment