Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | E4K03_RS03940 | Genome accession | NZ_CP038262 |
| Coordinates | 808724..809197 (+) | Length | 157 a.a. |
| NCBI ID | WP_001214064.1 | Uniprot ID | A0A0J8UYN3 |
| Organism | Acinetobacter baumannii strain LEV1449/17Ec | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 803724..814197
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4K03_RS03915 (E4K03_03915) | - | 804187..806292 (-) | 2106 | WP_001117590.1 | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | - |
| E4K03_RS03920 (E4K03_03920) | - | 806332..806462 (-) | 131 | Protein_746 | hypothetical protein | - |
| E4K03_RS03925 (E4K03_03925) | rpoZ | 806501..806779 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| E4K03_RS03930 (E4K03_03930) | gmk | 806852..807481 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| E4K03_RS03935 (E4K03_03935) | ispH | 807604..808554 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| E4K03_RS03940 (E4K03_03940) | fimU | 808724..809197 (+) | 474 | WP_001214064.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| E4K03_RS03945 (E4K03_03945) | pilV | 809191..809751 (+) | 561 | WP_085916952.1 | type IV pilus modification protein PilV | Machinery gene |
| E4K03_RS03950 (E4K03_03950) | pilW | 809752..810753 (+) | 1002 | WP_000079193.1 | PilW family protein | Machinery gene |
| E4K03_RS03955 (E4K03_03955) | pilX | 810750..811568 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16850.43 Da Isoelectric Point: 8.5355
>NTDB_id=352861 E4K03_RS03940 WP_001214064.1 808724..809197(+) (fimU) [Acinetobacter baumannii strain LEV1449/17Ec]
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
MRGIIPQEGFTLVELMVTIAVMAIIALMAAPSMSNLLESKRLDANQRDLINTLSEAKSQAILGRQNVSVNLNSTASNTPT
SLNWQTASNNTLELKNIAADGTQSSLTTTTLAFNANGVVANITQDTLLSICNSRINKKKVIILTKLGTLVFKAEENC
Nucleotide
Download Length: 474 bp
>NTDB_id=352861 E4K03_RS03940 WP_001214064.1 808724..809197(+) (fimU) [Acinetobacter baumannii strain LEV1449/17Ec]
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
ATGAGGGGAATTATTCCGCAAGAAGGGTTCACCTTGGTCGAGCTAATGGTGACGATTGCGGTCATGGCTATTATTGCACT
GATGGCTGCACCATCAATGTCAAATTTATTAGAAAGTAAACGTTTAGATGCTAATCAAAGAGACTTAATCAACACTTTAT
CAGAAGCGAAAAGTCAGGCAATTTTAGGACGTCAGAATGTTTCTGTTAACTTGAACTCAACAGCTTCAAATACACCCACT
TCATTAAATTGGCAGACAGCTTCTAATAATACTCTTGAGCTAAAAAATATAGCCGCTGATGGTACGCAAAGTTCTTTAAC
GACTACTACTTTAGCTTTTAACGCAAATGGAGTAGTGGCAAATATAACTCAAGATACGCTTTTATCTATTTGTAATTCTA
GAATAAATAAAAAGAAAGTCATTATTTTGACCAAGCTTGGCACTTTGGTTTTTAAGGCCGAGGAGAATTGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
99.363 |
100 |
0.994 |