Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GOM47_RS07430 Genome accession   NZ_CP046524
Coordinates   1460462..1461139 (-) Length   225 a.a.
NCBI ID   WP_000548981.1    Uniprot ID   A0ABU5G1H8
Organism   Streptococcus oralis strain SOT     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1455462..1466139
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM47_RS07410 - 1456233..1456607 (+) 375 WP_235080376.1 hypothetical protein -
  GOM47_RS07415 (GOM47_07410) - 1456870..1457493 (+) 624 WP_235080377.1 AAA family ATPase -
  GOM47_RS07420 (GOM47_07415) thrS 1457504..1459447 (+) 1944 WP_235080378.1 threonine--tRNA ligase -
  GOM47_RS07425 (GOM47_07420) - 1459495..1460469 (-) 975 WP_235080379.1 sensor histidine kinase -
  GOM47_RS07430 (GOM47_07425) braR 1460462..1461139 (-) 678 WP_000548981.1 response regulator transcription factor Regulator
  GOM47_RS07435 (GOM47_07430) - 1461296..1462390 (+) 1095 WP_235080380.1 DUF2974 domain-containing protein -
  GOM47_RS07440 (GOM47_07435) - 1462454..1463083 (+) 630 WP_235080381.1 MBL fold metallo-hydrolase -
  GOM47_RS07445 (GOM47_07440) - 1463122..1465014 (-) 1893 WP_235080382.1 M13 family metallopeptidase -
  GOM47_RS07450 (GOM47_07445) - 1465194..1465916 (+) 723 WP_235080383.1 metal ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25863.98 Da        Isoelectric Point: 4.9898

>NTDB_id=352833 GOM47_RS07430 WP_000548981.1 1460462..1461139(-) (braR) [Streptococcus oralis strain SOT]
MHKILLVEDDQVIRQQVGKLLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGEVLSLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLAGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=352833 GOM47_RS07430 WP_000548981.1 1460462..1461139(-) (braR) [Streptococcus oralis strain SOT]
ATGCACAAGATTTTACTAGTAGAAGATGACCAGGTTATTCGGCAACAAGTGGGAAAACTACTCTCTGAGTGGGGCTTTGA
GGTCGTTTTGGTAGAAGATTTTATGGAAGTATTGAGCCTTTTTGTTCAGTCAGAACCTCATTTGGTCCTCATGGATATTG
GACTGCCTCTTTTTAATGGTTACCACTGGTGTCAGGAGATTCGTAAGATTTCCAAAGTGCCCATCATGTTTCTTTCTTCG
AGAGATCAAGCGATGGATATCGTCATGGCGATCAATATGGGAGCAGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
GCTCCTTGCCAAGGTACAAGGCTTGTTGCGCCGTTCCTATGAATTTGGGCGGGATGAAAGTCTACTGGAGTATGCGGGTG
TGATCCTCAATACCAAGTCTATGGACCTGCACTATCAGGGGGAAGTTCTGAGTTTGACCAAGAATGAATTTCAAATTTTG
CGAGTGCTGTTTGAACATGCGGGCAATATCGTGGCGCGTGATGATCTGATGCGGGAACTCTGGAACAGTGACTTTTTCAT
CGATGACAATACCCTGTCTGTCAATGTTGCTCGTTTGCGCAAAAAGCTAGAGGAACAAGGCTTGGCAGGCTTTATCGAAA
CCAAGAAAGGGATAGGATACGGACTGAAACATGCTTGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471
  vicR Streptococcus mutans UA159

35.319

100

0.369

Multiple sequence alignment