Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GOM48_RS02900 | Genome accession | NZ_CP046523 |
| Coordinates | 584098..584694 (+) | Length | 198 a.a. |
| NCBI ID | WP_084945873.1 | Uniprot ID | - |
| Organism | Streptococcus oralis strain SOD | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 579098..589694
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GOM48_RS02885 (GOM48_02865) | - | 579879..580643 (+) | 765 | WP_235098253.1 | class I SAM-dependent methyltransferase | - |
| GOM48_RS09750 | - | 580819..580950 (+) | 132 | WP_265324768.1 | hypothetical protein | - |
| GOM48_RS02890 (GOM48_02870) | - | 580937..581788 (-) | 852 | WP_235098255.1 | MurR/RpiR family transcriptional regulator | - |
| GOM48_RS02895 (GOM48_02875) | pbp2b | 582045..584087 (+) | 2043 | WP_235098257.1 | penicillin-binding protein PBP2B | - |
| GOM48_RS02900 (GOM48_02880) | recR | 584098..584694 (+) | 597 | WP_084945873.1 | recombination mediator RecR | Machinery gene |
| GOM48_RS02905 (GOM48_02885) | - | 584869..585912 (+) | 1044 | WP_235098258.1 | D-alanine--D-alanine ligase | - |
| GOM48_RS02910 (GOM48_02890) | - | 585996..587369 (+) | 1374 | WP_235098260.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| GOM48_RS02915 (GOM48_02895) | - | 587356..587967 (+) | 612 | WP_235098262.1 | NUDIX hydrolase | - |
| GOM48_RS02920 (GOM48_02900) | - | 588163..588867 (+) | 705 | WP_235098265.1 | TIGR02206 family membrane protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21732.87 Da Isoelectric Point: 4.4927
>NTDB_id=352691 GOM48_RS02900 WP_084945873.1 584098..584694(+) (recR) [Streptococcus oralis strain SOD]
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSDDDVNEFAKNLLSAKRELTYCSICGRLTDDDPCSICTDPTRDQT
TILVLEDSRDVAAMENIQEYHGLYHVLHGLISPMNGISPDDINLKSLMTRLMDSEVSEVIVATNATADGEATSMYISRLL
KPAGIKVTRLARGLAVGADIEYADEVTLLRAIENRTEL
Nucleotide
Download Length: 597 bp
>NTDB_id=352691 GOM48_RS02900 WP_084945873.1 584098..584694(+) (recR) [Streptococcus oralis strain SOD]
ATGCTGTATCCAACACCTATTGCCAAGCTGATCGATAGCTATTCAAAGCTTCCGGGTATCGGGATCAAAACGGCTACCCG
CCTAGCCTTCTATACTATTGGAATGTCTGATGACGATGTCAATGAATTTGCCAAAAACCTCCTGTCTGCTAAGCGGGAAT
TGACCTATTGTTCCATTTGCGGTCGCTTGACTGACGATGATCCTTGCTCTATCTGTACAGATCCAACTCGTGACCAGACA
ACCATCTTAGTGCTAGAAGATAGTCGCGATGTGGCTGCCATGGAAAATATCCAAGAATATCACGGACTCTATCATGTCTT
GCATGGCCTCATTTCTCCTATGAATGGCATCAGTCCAGACGATATCAATCTCAAGAGTCTTATGACCCGTCTCATGGATA
GTGAGGTTTCAGAGGTGATTGTGGCAACCAATGCGACAGCGGATGGAGAAGCGACATCTATGTATATCTCTCGTCTTCTC
AAGCCAGCTGGTATCAAGGTCACTCGCCTAGCACGAGGTCTAGCCGTGGGAGCAGATATCGAGTATGCGGACGAAGTCAC
ACTCTTACGAGCCATTGAAAATCGGACAGAGTTGTAA
ATGCTGTATCCAACACCTATTGCCAAGCTGATCGATAGCTATTCAAAGCTTCCGGGTATCGGGATCAAAACGGCTACCCG
CCTAGCCTTCTATACTATTGGAATGTCTGATGACGATGTCAATGAATTTGCCAAAAACCTCCTGTCTGCTAAGCGGGAAT
TGACCTATTGTTCCATTTGCGGTCGCTTGACTGACGATGATCCTTGCTCTATCTGTACAGATCCAACTCGTGACCAGACA
ACCATCTTAGTGCTAGAAGATAGTCGCGATGTGGCTGCCATGGAAAATATCCAAGAATATCACGGACTCTATCATGTCTT
GCATGGCCTCATTTCTCCTATGAATGGCATCAGTCCAGACGATATCAATCTCAAGAGTCTTATGACCCGTCTCATGGATA
GTGAGGTTTCAGAGGTGATTGTGGCAACCAATGCGACAGCGGATGGAGAAGCGACATCTATGTATATCTCTCGTCTTCTC
AAGCCAGCTGGTATCAAGGTCACTCGCCTAGCACGAGGTCTAGCCGTGGGAGCAGATATCGAGTATGCGGACGAAGTCAC
ACTCTTACGAGCCATTGAAAATCGGACAGAGTTGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
98.99 |
100 |
0.99 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
62.626 |
100 |
0.626 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.718 |
98.485 |
0.48 |