Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GOM48_RS02100 Genome accession   NZ_CP046523
Coordinates   430935..431612 (+) Length   225 a.a.
NCBI ID   WP_235098063.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOD     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 425935..436612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM48_RS02080 (GOM48_02070) - 427284..427913 (-) 630 WP_235098057.1 MBL fold metallo-hydrolase -
  GOM48_RS02085 (GOM48_02075) - 427997..429070 (-) 1074 WP_235098059.1 DUF2974 domain-containing protein -
  GOM48_RS02090 (GOM48_02080) - 429182..429958 (-) 777 WP_235098061.1 ferredoxin reductase -
  GOM48_RS02095 (GOM48_02085) - 430044..430613 (-) 570 WP_235098713.1 TetR/AcrR family transcriptional regulator -
  GOM48_RS02100 (GOM48_02090) braR 430935..431612 (+) 678 WP_235098063.1 response regulator transcription factor Regulator
  GOM48_RS02105 (GOM48_02095) - 431605..432579 (+) 975 WP_235098066.1 sensor histidine kinase -
  GOM48_RS02110 (GOM48_02100) thrS 432627..434570 (-) 1944 WP_235098068.1 threonine--tRNA ligase -
  GOM48_RS02115 (GOM48_02105) - 434563..435204 (-) 642 WP_235098715.1 AAA family ATPase -
  GOM48_RS02120 (GOM48_02110) - 435467..435841 (-) 375 WP_001246988.1 hypothetical protein -

Sequence

Protein


Download         Length: 225 a.a.        Molecular weight: 25906.06 Da        Isoelectric Point: 4.9898

>NTDB_id=352682 GOM48_RS02100 WP_235098063.1 430935..431612(+) (braR) [Streptococcus oralis strain SOD]
MHKILLVEDDQVIRQQVGKLLSEWGFEVVLVEDFMEVLSLFVQSEPHLVLMDIGLPLFNGYHWCQEIRKISKVPIMFLSS
RDQAMDIVMAINMGADDFVTKPFDQQVLLAKVQGLLRRSYEFGRDESLLEYAGVILNTKSMDLHYQGEILSLTKNEFQIL
RVLFEHAGNIVARDDLMRELWNSDFFIDDNTLSVNVARLRKKLEEQGLVGFIETKKGIGYGLKHA

Nucleotide


Download         Length: 678 bp        

>NTDB_id=352682 GOM48_RS02100 WP_235098063.1 430935..431612(+) (braR) [Streptococcus oralis strain SOD]
ATGCACAAGATTTTACTAGTAGAGGATGATCAAGTCATTCGGCAACAAGTGGGTAAACTGCTCTCAGAATGGGGTTTTGA
GGTCGTTTTGGTAGAGGATTTTATGGAGGTATTGAGCCTTTTTGTTCAGTCAGAACCTCATTTGGTCCTCATGGATATTG
GTCTGCCTCTTTTTAATGGTTACCACTGGTGCCAGGAGATTCGCAAGATTTCCAAGGTACCCATTATGTTTTTGTCTTCG
AGAGACCAGGCGATGGATATCGTTATGGCAATCAATATGGGGGCAGATGACTTTGTGACCAAGCCTTTTGACCAGCAGGT
GCTTCTTGCCAAGGTTCAGGGCTTGTTGCGCCGTTCCTATGAATTTGGGCGGGATGAAAGTCTGCTGGAGTATGCGGGTG
TGATCCTCAATACCAAGTCTATGGACCTGCACTATCAGGGGGAAATCCTGAGTTTGACTAAGAATGAATTTCAAATTTTA
CGGGTCTTGTTTGAACATGCTGGCAATATCGTGGCGCGTGATGACCTGATGCGGGAACTCTGGAATAGCGACTTTTTCAT
CGATGACAATACCTTGTCCGTCAATGTTGCTCGCTTGCGCAAAAAGCTGGAGGAACAAGGCCTGGTAGGTTTTATCGAAA
CTAAGAAAGGGATAGGATACGGACTGAAACATGCTTGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-221)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

48.624

96.889

0.471
  vicR Streptococcus mutans UA159

35.319

100

0.369