Detailed information NTG0352504

Bioinformatically predicted

Overview

• Name: comGA
• Type: Machinery gene
• Locus tag: EOJ31_RS06595
• Genome accession: NZ_CP038242
• Coordinates: 1312418..1313392 (+)
• Length: 324 a.a.
• NCBI ID: WP_002465784.1
• Uniprot ID: -
• Organism: Staphylococcus warneri strain GD01
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1307418..1318392

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EOJ31_RS06560	rpmG	1307859..1308008 (+)	150	WP_002451882.1	50S ribosomal protein L33	-
EOJ31_RS06565	-	1308240..1308794 (+)	555	WP_015364967.1	5-formyltetrahydrofolate cyclo-ligase	-
EOJ31_RS06570	-	1308791..1310245 (+)	1455	WP_015364968.1	rhomboid family intramembrane serine protease	-
EOJ31_RS06575	-	1310235..1310438 (+)	204	WP_002451885.1	YqgQ family protein	-
EOJ31_RS06580	-	1310435..1311421 (+)	987	WP_002465775.1	ROK family glucokinase	-
EOJ31_RS06585	-	1311421..1311744 (+)	324	WP_015364969.1	MTH1187 family thiamine-binding protein	-
EOJ31_RS06590	-	1311748..1312371 (+)	624	WP_002465751.1	MBL fold metallo-hydrolase	-
EOJ31_RS06595	comGA	1312418..1313392 (+)	975	WP_002465784.1	competence type IV pilus ATPase ComGA	Machinery gene
EOJ31_RS06600	comGB	1313364..1314431 (+)	1068	WP_002465743.1	competence type IV pilus assembly protein ComGB	-
EOJ31_RS06605	comGC	1314444..1314761 (+)	318	WP_002465742.1	competence type IV pilus major pilin ComGC	Machinery gene
EOJ31_RS12600	comGD	1314739..1315179 (+)	441	WP_015364970.1	competence type IV pilus minor pilin ComGD	Machinery gene
EOJ31_RS06610	-	1315377..1315874 (+)	498	WP_002465737.1	competence type IV pilus minor pilin ComGF	-
EOJ31_RS06615	-	1316033..1316551 (+)	519	WP_037539765.1	shikimate kinase	-
EOJ31_RS06620	gcvT	1316723..1317814 (+)	1092	WP_002465750.1	glycine cleavage system aminomethyltransferase GcvT	-

Sequence

Protein

• Length: 324 a.a.
• Molecular weight: 37163.35 Da
• Isoelectric Point: 9.2695

>NTDB_id=352504 EOJ31_RS06595 WP_002465784.1 1312418..1313392(+) (comGA) [Staphylococcus warneri strain GD01]
MKILFQEIINKAIVYKASDVHFIPMEHYVHIKFRVNDTLTSYETLDIGIYRKLLVFMKFQAGLDVSTQQIAQSGRYTYKL
RSVYYLRISTLPLSIGSESCVIRIVPQYFQNKKETYEFNDFKHLMNKKQGLLLFTGPTGSGKSTLMYQMVMYAQKELNLN
VISIEDPVEQILKGITQISVNTKAGITYASSFKAILRCDPDVILIGEIRDAEIAKYVFQASLSGHLVLSTLHANDCKGAL
LRLLEMGITIQELSQAINLISNQRLITTSSQRRQLVCELMFKNQINYFFEHNQTMPRSFKRLSSKLDDMTKEGIICETIA
DKYI

Nucleotide

• Length: 975 bp

>NTDB_id=352504 EOJ31_RS06595 WP_002465784.1 1312418..1313392(+) (comGA) [Staphylococcus warneri strain GD01]
TTGAAGATATTATTTCAAGAAATAATTAATAAAGCTATAGTTTATAAAGCAAGTGATGTACATTTTATTCCAATGGAACA
TTATGTTCATATAAAATTCAGAGTGAATGATACTTTAACATCATATGAAACTCTTGATATCGGAATTTATCGTAAATTAC
TTGTTTTTATGAAATTTCAAGCAGGATTGGATGTGTCGACGCAGCAAATCGCTCAAAGTGGTCGTTACACATATAAATTA
AGATCAGTTTATTACTTACGTATTTCAACTCTCCCTTTATCAATCGGTAGTGAAAGTTGTGTAATTAGAATAGTGCCTCA
ATATTTTCAAAATAAAAAGGAAACTTATGAATTTAACGATTTTAAACATTTAATGAATAAGAAACAAGGATTATTGCTTT
TTACAGGACCAACTGGTTCAGGTAAAAGCACACTCATGTATCAAATGGTTATGTACGCGCAAAAAGAATTGAATCTCAAT
GTCATATCTATCGAAGACCCCGTAGAACAAATTTTAAAAGGTATTACTCAAATCTCAGTGAATACTAAAGCCGGTATTAC
TTATGCAAGTTCATTTAAAGCCATACTTCGGTGCGATCCAGATGTTATTTTGATTGGAGAAATCAGAGACGCTGAAATAG
CAAAATATGTGTTTCAAGCAAGCTTGAGTGGCCATTTAGTATTAAGTACATTACATGCTAATGATTGCAAAGGGGCATTG
TTAAGATTATTAGAGATGGGTATTACGATTCAAGAACTATCACAAGCTATCAATTTAATATCTAACCAACGTTTAATAAC
CACTTCAAGCCAACGACGCCAATTAGTTTGTGAACTTATGTTCAAAAATCAAATCAATTACTTTTTTGAACATAATCAAA
CAATGCCTAGATCTTTTAAGCGACTATCTTCAAAACTAGATGATATGACTAAAGAGGGAATTATATGTGAAACAATTGCT
GATAAATATATTTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (8-267)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGA	Staphylococcus aureus MW2	74.383	100	0.744
comGA	Staphylococcus aureus N315	74.383	100	0.744