Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   EOJ31_RS01270 Genome accession   NZ_CP038242
Coordinates   280286..281182 (+) Length   298 a.a.
NCBI ID   WP_002467359.1    Uniprot ID   A0A364UP95
Organism   Staphylococcus warneri strain GD01     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 275286..286182
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EOJ31_RS01245 - 275894..277360 (+) 1467 WP_019236103.1 poly-gamma-glutamate hydrolase family protein -
  EOJ31_RS01250 - 277541..277642 (+) 102 WP_015364644.1 SE2200 family small protein -
  EOJ31_RS01255 - 277725..279178 (-) 1454 Protein_248 alkaline phosphatase -
  EOJ31_RS01260 - 279435..279593 (+) 159 WP_002467360.1 hypothetical protein -
  EOJ31_RS01265 braR 279615..280280 (+) 666 WP_002467354.1 response regulator transcription factor Regulator
  EOJ31_RS01270 braS 280286..281182 (+) 897 WP_002467359.1 HAMP domain-containing sensor histidine kinase Regulator
  EOJ31_RS01275 - 281286..282032 (+) 747 WP_002467357.1 ABC transporter ATP-binding protein -
  EOJ31_RS01280 - 282050..284044 (+) 1995 WP_015364645.1 ABC transporter permease -
  EOJ31_RS01285 - 284167..285198 (+) 1032 WP_019236102.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34372.71 Da        Isoelectric Point: 5.1763

>NTDB_id=352489 EOJ31_RS01270 WP_002467359.1 280286..281182(+) (braS) [Staphylococcus warneri strain GD01]
MLLTFIKSIKNEIAIVTFISLLFVLIFFVFSLPQSALMLGVAIILFIMCIYWWISYLGFQKQEELKEKVVSLEEELFEMK
NKQIEYRKDVESYFLTWVHQIKTPITASQLLLERNEPNVANQVRQEIVQIDNYTRLALSYLKLLNEASDMTITEVNIDDL
IKPLIMKYRIHFIEQHTKIHYQSNDDSILTDAQWTSILIEQILNNALKYARGKDIWIDFDSTSQQLSIKDNGIGISQADL
PKIFDKGYSGYNGSLNESSSGIGLFIVKHIAQHLNLNVEVTSELNKGTQFTISFPTQS

Nucleotide


Download         Length: 897 bp        

>NTDB_id=352489 EOJ31_RS01270 WP_002467359.1 280286..281182(+) (braS) [Staphylococcus warneri strain GD01]
ATGTTACTAACGTTTATTAAATCAATTAAAAATGAAATAGCGATTGTTACGTTTATATCCTTACTGTTTGTACTCATTTT
CTTTGTGTTTTCACTCCCCCAAAGTGCGCTAATGCTTGGTGTAGCAATTATTTTATTTATTATGTGCATTTATTGGTGGA
TCAGTTATTTAGGTTTTCAAAAACAAGAAGAACTTAAAGAAAAAGTAGTATCACTCGAAGAAGAACTATTTGAAATGAAA
AACAAACAAATTGAATATCGTAAAGATGTTGAAAGTTATTTCTTAACATGGGTACATCAAATCAAAACGCCAATCACTGC
ATCGCAACTATTGCTAGAACGTAATGAACCTAATGTTGCCAATCAAGTGAGACAAGAAATTGTACAAATTGATAACTATA
CTCGTTTAGCACTAAGTTACTTAAAATTACTTAATGAAGCCTCGGATATGACAATCACAGAGGTGAACATAGATGATTTA
ATTAAACCTTTAATTATGAAATATCGAATTCACTTTATTGAACAACATACTAAAATTCATTATCAATCTAATGATGATAG
TATCTTAACAGATGCACAATGGACTTCAATATTGATAGAACAGATACTGAATAACGCATTAAAATATGCACGTGGAAAAG
ATATTTGGATTGACTTTGACTCAACGTCTCAACAATTATCTATTAAAGATAACGGGATTGGTATTAGTCAAGCAGACTTG
CCGAAAATCTTTGACAAAGGATATTCTGGTTACAATGGTAGCCTTAATGAATCCTCAAGCGGCATTGGATTGTTTATCGT
TAAACATATTGCGCAACATCTGAATTTAAATGTTGAAGTAACATCAGAATTGAATAAAGGTACACAATTTACAATTAGCT
TTCCAACGCAAAGCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(198-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A364UP95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

61.356

98.993

0.607

Multiple sequence alignment