Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   MGAS1882_RS06660 Genome accession   NC_017053
Coordinates   1350800..1351834 (-) Length   344 a.a.
NCBI ID   WP_002994331.1    Uniprot ID   -
Organism   Streptococcus pyogenes MGAS1882     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1345800..1356834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MGAS1882_RS06625 (MGAS1882_1369) - 1346576..1346878 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  MGAS1882_RS06630 (MGAS1882_1370) rnpM 1346871..1347167 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  MGAS1882_RS06635 (MGAS1882_1371) nusA 1347183..1348340 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  MGAS1882_RS06640 (MGAS1882_1372) rimP 1348515..1349051 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  MGAS1882_RS06650 (MGAS1882_1374) trmB 1349310..1349945 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  MGAS1882_RS06655 (MGAS1882_1375) ccrZ 1349945..1350736 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  MGAS1882_RS06660 (MGAS1882_1376) pptB 1350800..1351834 (-) 1035 WP_002994331.1 ABC transporter permease Regulator
  MGAS1882_RS06665 (MGAS1882_1377) pptA 1351837..1352562 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  MGAS1882_RS06670 (MGAS1882_1378) - 1352634..1353053 (+) 420 WP_002983376.1 HIT family protein -
  MGAS1882_RS06675 (MGAS1882_1379) - 1353050..1353406 (+) 357 WP_014407784.1 hypothetical protein -
  MGAS1882_RS06680 (MGAS1882_1380) brpA 1353517..1354800 (-) 1284 WP_014411892.1 biofilm formation/cell division transcriptional regulator BrpA -
  MGAS1882_RS06685 (MGAS1882_1381) - 1354809..1355333 (-) 525 WP_014407786.1 GNAT family N-acetyltransferase -
  MGAS1882_RS06690 (MGAS1882_1382) tsaE 1355308..1355769 (-) 462 WP_002983367.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40242.46 Da        Isoelectric Point: 10.3713

>NTDB_id=35245 MGAS1882_RS06660 WP_002994331.1 1350800..1351834(-) (pptB) [Streptococcus pyogenes MGAS1882]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNVLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=35245 MGAS1882_RS06660 WP_002994331.1 1350800..1351834(-) (pptB) [Streptococcus pyogenes MGAS1882]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAGCAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAACGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTATCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATGTGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427

Multiple sequence alignment