Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   GFX43_RS02995 Genome accession   NZ_CP046448
Coordinates   573200..573574 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain ZD01     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 568200..578574
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFX43_RS02975 (GFX43_002975) acdA 568739..569878 (+) 1140 WP_015384909.1 acyl-CoA dehydrogenase AcdA -
  GFX43_RS02980 (GFX43_002980) rpoE 570061..570582 (+) 522 WP_015384908.1 DNA-directed RNA polymerase subunit delta -
  GFX43_RS02985 (GFX43_002985) pyrG 570824..572431 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  GFX43_RS02990 (GFX43_002990) ywjG 572513..573034 (-) 522 WP_015384907.1 DUF2529 domain-containing protein -
  GFX43_RS02995 (GFX43_002995) letA 573200..573574 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  GFX43_RS03000 (GFX43_003000) fbaA 573755..574612 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  GFX43_RS03005 (GFX43_003005) fsa 574732..575370 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  GFX43_RS03015 (GFX43_003015) murAB 575748..577037 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  GFX43_RS03020 (GFX43_003020) glpX 577068..578033 (+) 966 WP_014481197.1 class II fructose-bisphosphatase -
  GFX43_RS03025 (GFX43_003025) - 578248..578409 (+) 162 WP_003227632.1 hypothetical protein -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=352324 GFX43_RS02995 WP_003227621.1 573200..573574(+) (letA) [Bacillus subtilis strain ZD01]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=352324 GFX43_RS02995 WP_003227621.1 573200..573574(+) (letA) [Bacillus subtilis strain ZD01]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363