Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GFX43_RS00720 Genome accession   NZ_CP046448
Coordinates   118301..119128 (-) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain ZD01     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 113301..124128
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GFX43_RS00695 (GFX43_000695) abrB 115647..115937 (+) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator
  GFX43_RS00700 (GFX43_000700) rsmI 115986..116864 (-) 879 WP_041517603.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GFX43_RS00705 (GFX43_000705) yazA 116839..117138 (-) 300 WP_014475567.1 GIY-YIG nuclease family protein -
  GFX43_RS00710 (GFX43_000710) trmNF 117125..117868 (-) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  GFX43_RS00715 (GFX43_000715) yabA 117927..118286 (-) 360 WP_003218308.1 replication initiation-control protein YabA -
  GFX43_RS00720 (GFX43_000720) yaaT 118301..119128 (-) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  GFX43_RS00725 (GFX43_000725) holB 119131..120120 (-) 990 WP_015482689.1 DNA polymerase III subunit delta' -
  GFX43_RS00730 (GFX43_000730) yaaR 120132..120572 (-) 441 WP_015382556.1 YaaR family protein -
  GFX43_RS00735 (GFX43_000735) darA 120585..120914 (-) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  GFX43_RS00740 (GFX43_000740) tmk 120988..121626 (-) 639 WP_003243137.1 dTMP kinase -
  GFX43_RS00745 (GFX43_000745) efpO 121623..123065 (-) 1443 WP_046340193.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=352312 GFX43_RS00720 WP_003226767.1 118301..119128(-) (yaaT) [Bacillus subtilis strain ZD01]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=352312 GFX43_RS00720 WP_003226767.1 118301..119128(-) (yaaT) [Bacillus subtilis strain ZD01]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTCAGAGAGCTTGTAAAGGATTTGG
CATCTATCTTTAAGACAAGGATTGAGCTGCGCCAAATAGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTCCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment