Detailed information NTG0352312

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: E3Z29_RS27145
• Genome accession: NZ_CP038207
• Coordinates: 5846897..5848243 (+)
• Length: 448 a.a.
• NCBI ID: WP_134787358.1
• Uniprot ID: -
• Organism: Pseudomonas sp. S150
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5841897..5853243

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E3Z29_RS27120 (E3Z29_27120)	pgeF	5842106..5842828 (-)	723	WP_134787357.1	peptidoglycan editing factor PgeF	-
E3Z29_RS27125 (E3Z29_27125)	rluD	5842825..5843787 (-)	963	WP_007963852.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
E3Z29_RS27130 (E3Z29_27130)	-	5843938..5844960 (+)	1023	WP_027612809.1	outer membrane protein assembly factor BamD	-
E3Z29_RS27135 (E3Z29_27135)	-	5845088..5845321 (+)	234	WP_027612810.1	PP0621 family protein	-
E3Z29_RS27140 (E3Z29_27140)	pilS	5845311..5846900 (+)	1590	WP_134787622.1	PAS domain-containing sensor histidine kinase	Regulator
E3Z29_RS27145 (E3Z29_27145)	pilR	5846897..5848243 (+)	1347	WP_134787358.1	sigma-54 dependent transcriptional regulator	Regulator
E3Z29_RS27150 (E3Z29_27150)	thiO	5848375..5849475 (-)	1101	WP_134787359.1	glycine oxidase ThiO	-
E3Z29_RS27155 (E3Z29_27155)	-	5849533..5849934 (-)	402	WP_097089243.1	type IV pilin protein	-
E3Z29_RS27160 (E3Z29_27160)	-	5849950..5853033 (-)	3084	WP_134787360.1	pilus assembly protein	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 49994.23 Da
• Isoelectric Point: 6.4266

>NTDB_id=352312 E3Z29_RS27145 WP_134787358.1 5846897..5848243(+) (pilR) [Pseudomonas sp. S150]
MNTSPRQKILIVDDEPDIRELLEITLGRMKLDTFSARNLGEAQALLQRNAFDLCLTDMRLPDGTGLDLVQHIQQRHPQLP
VAMITAYGSLETAINALKAGAFDFLTKPVDLTRLRELVSTALRMPAAGGVASSIDRRLLGDSQPMRDLRKQIDKLARSQA
PVYISGESGSGKELVARLIHEQGPRAQQPFVPVNCGAIPSELMESEFFGHRKGSFTGAVDDKPGLFQAAHGGTLFLDEVA
DLPLSMQVKLLRAIQEKAVRSVGGQQETVVDVRILCATHKDLEAEVAAGRFRQDLYYRLNVIELRVPSLRERRDDIEVLA
THMLQRLASNSGQPAAQLHPQALEALKRYRFPGNVRELENVLERAHTLCENQVIEAADLRLSEGNCAVEDGIADLTQIDN
LEDYLENVERKLILQALEETRWNRTAAAQRLSLSFRSMRYRLKKLGLD

Nucleotide

• Length: 1347 bp

>NTDB_id=352312 E3Z29_RS27145 WP_134787358.1 5846897..5848243(+) (pilR) [Pseudomonas sp. S150]
TTGAACACGAGCCCACGGCAAAAAATCCTCATCGTCGACGACGAACCGGATATCCGCGAACTCCTGGAAATCACCCTGGG
ACGGATGAAACTCGACACCTTCAGTGCTCGCAACCTCGGCGAAGCCCAGGCACTGTTGCAGCGCAATGCGTTCGACCTGT
GCCTGACCGACATGCGCCTGCCCGACGGCACGGGGCTGGACCTGGTGCAGCACATCCAGCAACGTCATCCACAACTGCCG
GTGGCGATGATCACCGCCTATGGCAGCCTGGAAACCGCGATCAATGCGCTGAAGGCCGGCGCCTTCGACTTCCTCACCAA
GCCGGTTGATCTCACGCGCCTGCGCGAACTGGTCAGCACCGCACTGCGCATGCCAGCGGCGGGGGGCGTCGCATCGTCGA
TAGATCGGCGCCTGCTCGGCGACTCGCAGCCCATGCGCGACCTTCGCAAACAGATCGACAAATTGGCGCGCAGTCAGGCA
CCGGTCTACATCAGCGGCGAATCGGGCAGCGGCAAAGAACTGGTCGCGCGGCTGATCCACGAACAAGGGCCGCGCGCGCA
ACAGCCGTTTGTACCGGTCAATTGCGGGGCGATCCCTTCAGAGCTGATGGAGAGCGAATTTTTTGGCCATCGCAAAGGCA
GCTTTACCGGCGCGGTGGACGACAAACCGGGGCTGTTTCAGGCCGCGCACGGCGGCACCCTGTTTCTCGATGAAGTGGCG
GATCTGCCGCTGTCGATGCAAGTCAAGCTGCTGCGGGCGATTCAGGAAAAAGCCGTGCGCAGCGTCGGCGGCCAGCAAGA
AACCGTGGTCGATGTGCGCATTCTGTGCGCCACACACAAAGACCTGGAAGCGGAAGTCGCCGCCGGGCGCTTTCGCCAGG
ACCTGTATTACCGCTTGAATGTGATCGAACTGCGCGTGCCATCCCTGCGCGAACGGCGCGACGACATCGAAGTGCTGGCC
ACGCACATGCTCCAGCGTCTGGCCAGCAACAGTGGCCAGCCGGCAGCCCAATTGCACCCGCAAGCGCTTGAAGCACTGAA
GCGTTATCGTTTTCCCGGAAATGTGCGAGAACTGGAGAATGTCCTCGAACGCGCGCACACTCTGTGCGAAAACCAGGTGA
TCGAGGCTGCGGATTTGCGCTTGAGCGAAGGCAATTGCGCAGTCGAGGACGGCATTGCCGACCTGACGCAGATCGATAAC
CTTGAGGACTATCTGGAAAACGTCGAGCGCAAACTGATCCTGCAGGCGCTGGAGGAAACGCGCTGGAATCGCACGGCGGC
AGCGCAACGCTTGAGCCTGTCGTTTCGCTCGATGCGCTACAGGCTGAAGAAACTCGGTCTGGATTGA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

• Response regulator receiver domain (Response_reg) (9-118)

• Sigma-54 interaction domain (Sigma54_activat) (139-304)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	79.007	98.884	0.781
pilR	Acinetobacter baumannii strain A118	48.584	100	0.498