Detailed information NTG0351624

Bioinformatically predicted

Overview

• Name: tsaP
• Type: Machinery gene
• Locus tag: GNT44_RS00245
• Genome accession: NZ_CP046402
• Coordinates: 57582..58607 (+)
• Length: 341 a.a.
• NCBI ID: WP_003097294.1
• Uniprot ID: A0A0H2ZJL6
• Organism: Pseudomonas aeruginosa strain SE5331
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 52582..63607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GNT44_RS00220 (GNT44_00220)	-	52771..53088 (-)	318	WP_003097288.1	tetratricopeptide repeat protein	-
GNT44_RS00225 (GNT44_00225)	trkA	53237..54610 (-)	1374	WP_003097289.1	Trk system potassium transporter TrkA	-
GNT44_RS00230 (GNT44_00230)	rsmB	54637..55941 (-)	1305	WP_014603454.1	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	-
GNT44_RS00235 (GNT44_00235)	fmt	55938..56882 (-)	945	WP_023098410.1	methionyl-tRNA formyltransferase	-
GNT44_RS00240 (GNT44_00240)	def	56937..57443 (-)	507	WP_003097293.1	peptide deformylase	-
GNT44_RS00245 (GNT44_00245)	tsaP	57582..58607 (+)	1026	WP_003097294.1	LysM peptidoglycan-binding domain-containing protein	Machinery gene
GNT44_RS00250 (GNT44_00250)	dprA	58742..59830 (+)	1089	WP_014602326.1	DNA-processing protein DprA	Machinery gene
GNT44_RS00255 (GNT44_00255)	-	59871..60428 (+)	558	WP_003097300.1	Sua5/YciO/YrdC/YwlC family protein	-
GNT44_RS00260 (GNT44_00260)	-	60438..61415 (-)	978	WP_003097303.1	NADPH:quinone reductase	-
GNT44_RS00265 (GNT44_00265)	hemF	61606..62523 (+)	918	WP_003097311.1	oxygen-dependent coproporphyrinogen oxidase	-
GNT44_RS00270 (GNT44_00270)	aroE	62581..63405 (+)	825	WP_003097314.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37586.01 Da
• Isoelectric Point: 9.3358

>NTDB_id=351624 GNT44_RS00245 WP_003097294.1 57582..58607(+) (tsaP) [Pseudomonas aeruginosa strain SE5331]
MRKSLVALLLLAASGLAQAQVDLREGHPDRYTVVRGDTLWDISGKFLRQPWKWPELWHANPQIQNPHLIYPGDTLSLVYV
DGQPRLVLNRGESRGTIKLSPKIRSTPIAEAIPTIPLDKINSFLLANRIVDDEKTFTSAPYIVAGNAERIVSGTGDRIYA
RGKFADGQPAYGIFRQGKVYIDPKTKEVLGINADDIGGGEVVATEGDVATLALTRTTQEVRLGDRLFPTEERAVNSTFMP
GEPSREVKGEIIDVPRGVTQIGQFDVVTLNRGQRDGLAEGNVLAIYKVGETVRDRVTGESVKIPDERAGLLMVFRTYKKL
SYALVLMASRPLSVTDRVQNP

Nucleotide

• Length: 1026 bp

>NTDB_id=351624 GNT44_RS00245 WP_003097294.1 57582..58607(+) (tsaP) [Pseudomonas aeruginosa strain SE5331]
ATGAGGAAATCACTAGTCGCCCTTCTGCTCCTTGCCGCGAGCGGTCTGGCGCAGGCCCAGGTCGACCTCAGGGAAGGGCA
TCCGGACCGCTACACGGTGGTCAGGGGCGATACCCTGTGGGACATCTCGGGGAAATTCCTCCGCCAGCCATGGAAGTGGC
CGGAACTCTGGCACGCCAACCCGCAGATCCAGAATCCCCACCTGATCTACCCCGGCGACACCCTCAGCCTGGTCTACGTC
GATGGCCAGCCGCGCCTGGTGCTGAACCGTGGCGAATCGCGCGGGACCATCAAGCTGTCGCCGAAGATCCGCAGCACGCC
GATCGCCGAGGCCATCCCGACCATCCCGCTGGACAAGATCAACAGCTTCCTGCTGGCCAACCGCATCGTCGATGACGAGA
AGACCTTCACCAGCGCGCCGTACATCGTCGCCGGCAACGCCGAGCGGATCGTCAGCGGCACCGGCGACCGCATCTACGCC
CGCGGCAAGTTCGCCGACGGCCAGCCGGCCTATGGCATCTTCCGCCAGGGCAAGGTCTACATCGATCCGAAGACCAAGGA
AGTCCTCGGCATCAACGCCGACGACATCGGCGGCGGCGAGGTGGTAGCCACCGAAGGCGACGTCGCGACCCTGGCGCTGA
CCCGCACCACCCAGGAAGTGCGCCTGGGCGACCGCCTGTTCCCCACCGAGGAGCGTGCGGTGAATTCCACCTTCATGCCC
GGCGAGCCGAGCCGCGAGGTGAAGGGCGAAATCATCGACGTACCGCGCGGCGTGACCCAGATCGGCCAGTTCGACGTGGT
CACCCTGAACCGTGGCCAGCGCGACGGGCTGGCCGAGGGCAACGTGCTGGCGATCTACAAGGTCGGCGAGACGGTGCGCG
ACCGCGTTACCGGTGAGTCGGTGAAGATTCCCGACGAACGCGCCGGCCTGCTGATGGTGTTCCGTACCTACAAGAAGCTG
AGCTACGCCCTGGTTCTGATGGCCAGCAGGCCGCTCTCGGTAACCGACAGGGTGCAGAATCCCTGA

Domains

Predicted by InterProScan.

• LysM domain (LysM) (31-76)

3D structure

• AlphaFold DB: A0A0H2ZJL6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
tsaP	Acinetobacter baumannii D1279779	36.512	100	0.393