Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CAP2UW1_RS17780 Genome accession   NC_013194
Coordinates   4092608..4092967 (+) Length   119 a.a.
NCBI ID   WP_199931731.1    Uniprot ID   -
Organism   Candidatus Accumulibacter phosphatis     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4087608..4097967
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAP2UW1_RS17755 (CAP2UW1_3581) - 4087956..4089338 (+) 1383 WP_015768007.1 CorA family divalent cation transporter -
  CAP2UW1_RS17760 (CAP2UW1_3582) hemL 4089396..4090676 (-) 1281 WP_015768008.1 glutamate-1-semialdehyde 2,1-aminomutase -
  CAP2UW1_RS17765 (CAP2UW1_3583) thiE 4090673..4091317 (-) 645 WP_015768009.1 thiamine phosphate synthase -
  CAP2UW1_RS17770 (CAP2UW1_3584) - 4091310..4092158 (-) 849 WP_015768010.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  CAP2UW1_RS17775 (CAP2UW1_3585) - 4092292..4092480 (+) 189 WP_015768011.1 rubredoxin -
  CAP2UW1_RS17780 (CAP2UW1_3586) pilG 4092608..4092967 (+) 360 WP_199931731.1 response regulator Regulator
  CAP2UW1_RS17785 (CAP2UW1_3587) - 4093011..4093373 (+) 363 WP_015768013.1 response regulator -
  CAP2UW1_RS17790 (CAP2UW1_3588) - 4093388..4093897 (+) 510 WP_015768014.1 chemotaxis protein CheW -
  CAP2UW1_RS17795 (CAP2UW1_3589) - 4094036..4096135 (+) 2100 WP_291911042.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 119 a.a.        Molecular weight: 13125.19 Da        Isoelectric Point: 7.7164

>NTDB_id=35157 CAP2UW1_RS17780 WP_199931731.1 4092608..4092967(+) (pilG) [Candidatus Accumulibacter phosphatis]
MVIDDSNTIRRSAEIFLVQAGCQVLLAEDGFDALAKIADHQPAVIFCDIVMPRLDGYQTCALIKKNQRFRSTPVIMLSSK
DGLFDRARGRMVGSDQYLTKPFTKDSLLQTVASFAPPSA

Nucleotide


Download         Length: 360 bp        

>NTDB_id=35157 CAP2UW1_RS17780 WP_199931731.1 4092608..4092967(+) (pilG) [Candidatus Accumulibacter phosphatis]
ATGGTCATCGATGACAGCAATACGATACGGCGCAGCGCTGAGATTTTCCTTGTCCAGGCTGGCTGTCAGGTGTTGCTTGC
CGAGGACGGCTTCGATGCGTTGGCGAAAATTGCCGACCACCAGCCGGCAGTTATTTTCTGCGACATCGTGATGCCGCGCC
TTGACGGTTACCAGACCTGTGCCTTGATCAAGAAGAACCAGCGCTTTCGATCAACGCCAGTAATCATGCTGTCCTCGAAG
GACGGCCTGTTCGACCGCGCGCGTGGTCGCATGGTCGGCTCGGATCAGTACCTGACCAAGCCTTTTACCAAGGATAGCCT
GCTGCAGACGGTGGCGTCTTTTGCGCCTCCGTCCGCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(1-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

66.667

93.277

0.622
  pilH Synechocystis sp. PCC 6803

38.596

95.798

0.37

Multiple sequence alignment