Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   E3C75_RS10655 Genome accession   NZ_CP038020
Coordinates   2036231..2036962 (-) Length   243 a.a.
NCBI ID   WP_084829044.1    Uniprot ID   A0A0E2QFV4
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 2031231..2041962
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS10630 - 2032295..2033476 (+) 1182 WP_111679681.1 NAD(P)/FAD-dependent oxidoreductase -
  E3C75_RS10640 trmB 2033697..2034338 (-) 642 WP_046206494.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  E3C75_RS10645 - 2034348..2035139 (-) 792 WP_002951667.1 phosphotransferase family protein -
  E3C75_RS10650 pptB 2035197..2036234 (-) 1038 WP_023909891.1 ABC transporter permease Regulator
  E3C75_RS10655 pptA 2036231..2036962 (-) 732 WP_084829044.1 ABC transporter ATP-binding protein Regulator
  E3C75_RS10660 - 2037027..2037452 (+) 426 WP_100273371.1 HIT family protein -
  E3C75_RS10665 - 2037449..2037745 (+) 297 WP_084829046.1 hypothetical protein -
  E3C75_RS10670 - 2037765..2038115 (-) 351 WP_111679682.1 ribonuclease -
  E3C75_RS10675 - 2038153..2038497 (-) 345 WP_100273370.1 hypothetical protein -
  E3C75_RS10680 - 2038517..2039014 (-) 498 WP_223899742.1 hypothetical protein -
  E3C75_RS10685 - 2039075..2040250 (-) 1176 WP_111679683.1 IS256-like element IS1191 family transposase -

Sequence

Protein


Download         Length: 243 a.a.        Molecular weight: 26800.96 Da        Isoelectric Point: 4.4600

>NTDB_id=351433 E3C75_RS10655 WP_084829044.1 2036231..2036962(-) (pptA) [Streptococcus thermophilus strain ATCC 19258]
MLKLEKVTGGYANIPVLKDVTFEVADGELVGLIGLNGAGKSTTINEIIGLLTPYGGQIVIDGLSIQQDSASYRQKIGYIP
ETPSLYEELTLREHLETVLMAYGLDVTEGMAHADKYLKLFRLDEKLDWFPTQFSKGMKQKVMIICAFIVNPSLFIVDEPF
LGLDPLAISDLIELLAEEKANGKSILMSTHVLDSAEKMCDRFVILHHGQVLAQGTIDELRQTFGDSSASLNDIYMQLTKG
ELS

Nucleotide


Download         Length: 732 bp        

>NTDB_id=351433 E3C75_RS10655 WP_084829044.1 2036231..2036962(-) (pptA) [Streptococcus thermophilus strain ATCC 19258]
ATGCTTAAATTAGAAAAGGTGACGGGTGGTTATGCCAATATTCCCGTCCTAAAAGATGTCACTTTTGAGGTGGCTGATGG
TGAATTAGTTGGCCTTATTGGTCTCAATGGTGCCGGAAAATCAACAACAATTAACGAGATTATTGGTCTCTTGACACCCT
ACGGGGGACAGATTGTTATTGATGGTTTGAGCATACAGCAAGATTCGGCTAGCTACCGTCAAAAGATTGGCTACATTCCT
GAAACGCCAAGTCTTTATGAAGAATTGACGCTTCGTGAACATTTGGAAACTGTGCTTATGGCATATGGCCTTGATGTTAC
AGAAGGAATGGCACATGCAGACAAGTACCTCAAACTTTTTCGCTTAGATGAAAAGTTGGACTGGTTCCCGACTCAGTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGCGCCTTTATTGTCAACCCAAGTCTTTTCATTGTTGATGAGCCCTTT
TTGGGATTGGATCCCTTGGCGATTTCTGATTTGATTGAGCTTCTGGCTGAGGAAAAAGCCAATGGCAAGTCTATTCTCAT
GTCGACTCACGTTTTGGATTCAGCTGAGAAGATGTGTGATCGTTTTGTGATTTTGCACCATGGACAGGTCTTGGCACAGG
GGACGATTGATGAGCTTCGTCAGACCTTTGGTGACAGTAGTGCTAGTCTTAACGATATCTATATGCAGTTGACTAAGGGA
GAATTGTCATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2QFV4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

97.942

100

0.979
  pptA Streptococcus salivarius strain HSISS4

95.885

100

0.959

Multiple sequence alignment