Detailed information NTG0351414

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GL189_RS10605
• Genome accession: NZ_CP046360
• Coordinates: 2071748..2072845 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266669.1
• Uniprot ID: C1CBK4
• Organism: Streptococcus pneumoniae strain 574
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2066748..2077845

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL189_RS10580 (GL189_10765)	pgsA	2067269..2067814 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GL189_RS10585 (GL189_10770)	rodZ	2067825..2068646 (-)	822	WP_001227957.1	cytoskeleton protein RodZ	-
GL189_RS10590 (GL189_10775)	yfmH	2068688..2069971 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GL189_RS10595 (GL189_10780)	yfmF	2069968..2071218 (-)	1251	WP_000424267.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GL189_RS10600 (GL189_10785)	yaaA	2071377..2071745 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
GL189_RS10605 (GL189_10790)	recF	2071748..2072845 (+)	1098	WP_000266669.1	DNA replication/repair protein RecF	Machinery gene
GL189_RS10610 (GL189_10795)	guaB	2072896..2074374 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
GL189_RS10615 (GL189_10800)	trpS	2074526..2075551 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
GL189_RS10620 (GL189_10805)	-	2075757..2077379 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41960.00 Da
• Isoelectric Point: 8.6746

>NTDB_id=351414 GL189_RS10605 WP_000266669.1 2071748..2072845(+) (recF) [Streptococcus pneumoniae strain 574]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=351414 GL189_RS10605 WP_000266669.1 2071748..2072845(+) (recF) [Streptococcus pneumoniae strain 574]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: C1CBK4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46