Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   E3C75_RS01925 Genome accession   NZ_CP038020
Coordinates   361914..362681 (+) Length   255 a.a.
NCBI ID   WP_133264061.1    Uniprot ID   -
Organism   Streptococcus thermophilus strain ATCC 19258     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 356914..367681
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3C75_RS01910 - 359230..359913 (-) 684 WP_111679765.1 YoaK family protein -
  E3C75_RS01915 rlmH 359929..360408 (-) 480 WP_084829195.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3C75_RS01920 htrA 360613..361848 (+) 1236 WP_111679766.1 trypsin-like peptidase domain-containing protein Regulator
  E3C75_RS01925 spo0J 361914..362681 (+) 768 WP_133264061.1 ParB/RepB/Spo0J family partition protein Regulator
  E3C75_RS01930 dnaA 362920..364284 (+) 1365 WP_084828394.1 chromosomal replication initiator protein DnaA -
  E3C75_RS01935 dnaN 364430..365566 (+) 1137 WP_011226715.1 DNA polymerase III subunit beta -
  E3C75_RS01940 - 365617..365808 (+) 192 WP_084828396.1 DUF951 domain-containing protein -
  E3C75_RS01945 ychF 366021..367136 (+) 1116 WP_002948588.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 29487.92 Da        Isoelectric Point: 9.6649

>NTDB_id=351385 E3C75_RS01925 WP_133264061.1 361914..362681(+) (spo0J) [Streptococcus thermophilus strain ATCC 19258]
MSEQLKTLSISEIYPNPFQPRLKFSDEELVELSQSISENGLIQPIIVRKSDIIGYELIAGERRLRACKRLGMTEIPAVVK
EVTDQESRKQAIIENLQRSNLNPIEEAKAYRNLIDELTYSHEELAKAMGKSRPYISNVLRLLQLPREIQTSIENGSLSQG
HARALLAIEDSRKQLTIFQQVVAERWSVRTLEKKLQELPRKQKSKKDTHVKDKEKELERSLGLPITLRYHKNHSGTIQIH
FSIEEDFNRIINKLI

Nucleotide


Download         Length: 768 bp        

>NTDB_id=351385 E3C75_RS01925 WP_133264061.1 361914..362681(+) (spo0J) [Streptococcus thermophilus strain ATCC 19258]
ATGTCAGAACAACTCAAAACTTTATCTATTAGTGAAATTTACCCCAATCCTTTTCAACCTCGTCTAAAATTCTCCGATGA
AGAGTTAGTAGAACTAAGTCAATCAATATCAGAAAATGGTTTAATACAGCCAATTATTGTACGAAAATCTGACATTATTG
GTTATGAACTAATTGCTGGAGAAAGACGTTTACGAGCCTGTAAACGTTTAGGGATGACAGAAATCCCTGCAGTTGTAAAG
GAAGTTACAGATCAAGAGAGTCGTAAACAAGCTATTATTGAAAATCTACAACGATCAAATCTCAATCCTATTGAAGAAGC
AAAGGCCTATCGTAATTTAATTGATGAGTTAACTTATAGTCACGAGGAGCTCGCTAAAGCTATGGGAAAATCTAGACCAT
ATATTAGTAACGTTCTTAGACTACTACAACTTCCGCGAGAGATACAAACGAGTATTGAAAACGGAAGTCTGAGTCAGGGA
CATGCTAGAGCACTCTTAGCTATTGAGGATTCTCGAAAGCAGTTAACCATCTTTCAGCAGGTTGTGGCTGAAAGATGGTC
TGTTCGTACTCTAGAAAAAAAACTTCAGGAACTTCCTAGAAAACAAAAATCTAAAAAAGATACCCATGTAAAAGATAAAG
AAAAAGAACTTGAAAGATCACTAGGTCTCCCTATAACTCTACGTTATCACAAAAATCACTCAGGAACGATTCAAATACAC
TTTTCGATAGAAGAAGATTTTAACAGAATTATCAACAAGCTTATCTAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(8-95)

HTH domain found in ParB protein (HTH_ParB)

(147-196)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

56.863

100

0.569

Multiple sequence alignment