Detailed information NTG0351353

Bioinformatically predicted

Overview

• Name: comL
• Type: Machinery gene
• Locus tag: EZJ17_RS04820
• Genome accession: NZ_CP038018
• Coordinates: 909236..910045 (+)
• Length: 269 a.a.
• NCBI ID: WP_067438980.1
• Uniprot ID: A0AAX1F7X2
• Organism: Eikenella exigua strain PXX
• Function: DNA processing; DNA transport into the cytoplasm (predicted from homology) DNA processing DNA binding and uptake

Genomic Context

Location: 904236..915045

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EZJ17_RS04790 (EZJ17_04775)	-	904601..905245 (+)	645	Protein_942	DUF533 domain-containing protein	-
EZJ17_RS04795 (EZJ17_04780)	-	905322..905906 (-)	585	WP_067438995.1	DUF1043 family protein	-
EZJ17_RS04800 (EZJ17_04785)	-	906004..906486 (-)	483	WP_067438992.1	DUF4279 domain-containing protein	-
EZJ17_RS04805 (EZJ17_04790)	-	906497..907000 (-)	504	WP_067438989.1	phosphatidylglycerophosphatase A	-
EZJ17_RS04810 (EZJ17_04795)	thiL	906993..907979 (-)	987	WP_067438986.1	thiamine-phosphate kinase	-
EZJ17_RS04815 (EZJ17_04800)	rluD	908119..909237 (-)	1119	WP_067438983.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
EZJ17_RS04820 (EZJ17_04805)	comL	909236..910045 (+)	810	WP_067438980.1	outer membrane protein assembly factor BamD	Machinery gene
EZJ17_RS04825 (EZJ17_04810)	-	910132..910554 (+)	423	WP_067438977.1	DUF4124 domain-containing protein	-
EZJ17_RS04830 (EZJ17_04815)	-	910704..911546 (+)	843	WP_067438974.1	J domain-containing protein	-
EZJ17_RS04835 (EZJ17_04820)	-	911549..912325 (+)	777	WP_067438971.1	ferredoxin--NADP reductase	-
EZJ17_RS04840 (EZJ17_04825)	aroG	912599..913651 (+)	1053	WP_067438968.1	3-deoxy-7-phosphoheptulonate synthase AroG	-
EZJ17_RS04845 (EZJ17_04830)	-	913851..914396 (+)	546	WP_067438965.1	RDD family protein	-
EZJ17_RS04850 (EZJ17_04835)	-	914567..915034 (+)	468	WP_167508171.1	RDD family protein	-

Sequence

Protein

• Length: 269 a.a.
• Molecular weight: 31384.48 Da
• Isoelectric Point: 9.1458

>NTDB_id=351353 EZJ17_RS04820 WP_067438980.1 909236..910045(+) (comL) [Eikenella exigua strain PXX]
MKKILLVTGLAVMLSACSSTSTTAVSQDAQITQDWSVDKLYAEAHEEMESRNYSRSVRLYEILRARFPNTRQAVQSRLDT
AYVYYKDEQQPQALAHVEQFLKLYPNHPNTDYALYLKGLIVLNQDKSIFNKLASQDWSDRDPKANREAYQVFNELITRFP
NSKYANDAREKMTRLVDALGGNEMAIARYYMQRGAYLAAANRAQGIVSRYQNTRYVEEALAIMMTAYTRLEKPELSSDTR
RVLAQNFPQSPYLQKEWQPDDIPWWRYWK

Nucleotide

• Length: 810 bp

>NTDB_id=351353 EZJ17_RS04820 WP_067438980.1 909236..910045(+) (comL) [Eikenella exigua strain PXX]
ATGAAAAAGATTCTTTTAGTTACCGGCCTGGCAGTGATGCTGTCGGCCTGCTCCAGCACTTCAACCACCGCTGTGAGCCA
AGATGCCCAGATTACGCAGGATTGGTCGGTAGATAAGCTGTATGCCGAAGCGCACGAGGAAATGGAGAGCCGCAATTATA
GCCGTTCAGTGCGCTTATATGAAATTTTGCGGGCGCGTTTCCCAAACACCCGCCAAGCGGTGCAATCGCGGCTGGATACG
GCTTATGTGTATTATAAAGACGAGCAGCAGCCGCAGGCACTGGCGCATGTGGAGCAGTTTTTGAAGCTGTATCCCAACCA
TCCGAACACCGATTACGCGCTGTATCTGAAGGGCTTGATTGTGCTCAATCAAGACAAATCCATCTTCAACAAGCTGGCCT
CGCAGGATTGGTCCGACCGCGACCCGAAAGCAAACCGCGAAGCCTATCAGGTGTTCAACGAGCTCATCACCCGCTTCCCC
AATAGCAAATACGCCAACGACGCGCGCGAGAAAATGACGCGCCTGGTGGATGCGCTGGGCGGTAACGAAATGGCCATCGC
ACGCTACTATATGCAGCGCGGCGCTTACTTGGCCGCCGCCAACCGCGCACAGGGGATTGTGAGCCGCTATCAGAATACGC
GTTATGTGGAAGAGGCGCTGGCGATTATGATGACCGCCTACACCCGTTTGGAAAAACCGGAGTTGAGCAGCGACACTCGC
CGCGTGTTAGCGCAAAACTTCCCGCAAAGCCCTTATTTGCAGAAAGAATGGCAGCCGGACGATATTCCGTGGTGGCGCTA
TTGGAAATAG

Domains

Predicted by InterproScan.

• Prokaryotic membrane lipoprotein lipid attachment site (LPAM_1) (1-18)

• Outer membrane lipoprotein (YfiO) (36-238)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comL	Neisseria gonorrhoeae MS11	66.418	99.628	0.662
comL	Neisseria meningitidis MC58	66.045	99.628	0.658