Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   AHTJR_RS14475 Genome accession   NZ_CP038009
Coordinates   3081754..3083319 (+) Length   521 a.a.
NCBI ID   WP_134252976.1    Uniprot ID   A0A4P7BA38
Organism   Acinetobacter haemolyticus strain TJR01     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3076754..3088319
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AHTJR_RS14455 (AHTJR_14455) - 3077266..3078567 (+) 1302 WP_026056262.1 homoserine dehydrogenase -
  AHTJR_RS14460 (AHTJR_14460) thrC 3078626..3079765 (+) 1140 WP_004637599.1 threonine synthase -
  AHTJR_RS14465 (AHTJR_14465) pbpG 3079825..3080889 (-) 1065 WP_004637598.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  AHTJR_RS14470 (AHTJR_14470) - 3081100..3081735 (+) 636 WP_005083960.1 response regulator -
  AHTJR_RS14475 (AHTJR_14475) pilS 3081754..3083319 (+) 1566 WP_134252976.1 sensor histidine kinase Regulator
  AHTJR_RS14480 (AHTJR_14480) pilR 3083342..3084772 (+) 1431 WP_005083966.1 sigma-54-dependent transcriptional regulator Regulator
  AHTJR_RS14485 (AHTJR_14485) - 3084811..3085977 (-) 1167 WP_008942249.1 S41 family peptidase -
  AHTJR_RS14490 (AHTJR_14490) gpmI 3085987..3087531 (-) 1545 WP_100834131.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 521 a.a.        Molecular weight: 59504.63 Da        Isoelectric Point: 6.7463

>NTDB_id=351255 AHTJR_RS14475 WP_134252976.1 3081754..3083319(+) (pilS) [Acinetobacter haemolyticus strain TJR01]
MLGKVASSVSQTIYQLGMWYSGYRLIISVCLLLIFLLTAEQLTTNYLYPTLYSYTLIVYIAFNVSQLLFLKLFPAHVNKQ
LIAIFLVDVICLSTITFATGGPNLQLSLLYVIIIFASAILLNAQLSLVVTLLAVIMIVYQRFLGNLFDYNNLNHLSNSLL
LVFLFLVVYAIGRIAVQRFKILEALTFHQSIEIHQLQNINRYILEQIEDGYLVLDESNHIVLTNPAANTLLGIHLPVSHE
KTPLIKWQPDLFELIKFSDLEDGEEFTFESQQSLYTVHVRVKHLVVPEQALVLLILKDAQKLTQRVQQLKLAALGQLSAS
IAHEIRNPLAAIVQANELFNESDAHQQQMLTRMIRKQAKRIDRIVEDTLAMARNKPTEPQNIHLMEFFKSLFEEDLVDVK
HMIQLELSENIQILFDDKQLRQVLINLVRNALRHNASDIPYIEIKVHAEETKVRIDVIDFGLGVAKRDLSQLFKPFFSTE
IKGTGLGLYLSHSFCEANHAKLTYVERQQGACFRIECSIIN

Nucleotide


Download         Length: 1566 bp        

>NTDB_id=351255 AHTJR_RS14475 WP_134252976.1 3081754..3083319(+) (pilS) [Acinetobacter haemolyticus strain TJR01]
ATGTTGGGAAAAGTTGCATCTTCGGTGTCACAAACCATTTACCAGCTTGGGATGTGGTATAGCGGATATCGCCTCATTAT
TTCCGTTTGCCTATTGCTCATTTTCTTGTTAACTGCTGAGCAACTGACCACCAATTATCTTTACCCAACATTGTATTCTT
ATACGCTGATTGTCTATATTGCATTCAATGTCAGTCAGCTTTTATTTCTTAAATTATTTCCGGCTCACGTGAATAAACAG
CTGATTGCGATCTTTCTCGTCGATGTCATCTGTTTAAGTACCATTACCTTTGCAACAGGTGGGCCAAACTTACAGCTCAG
TTTGCTTTACGTCATTATTATTTTTGCCTCGGCAATTTTATTGAATGCTCAGCTTTCTCTAGTGGTAACGCTGCTCGCTG
TCATCATGATTGTGTATCAGCGTTTTCTGGGCAATTTATTTGACTACAACAATTTAAACCATCTCAGTAATAGCCTGCTG
TTGGTATTTTTATTCTTGGTGGTATATGCCATAGGGCGTATTGCAGTACAGCGTTTTAAAATTTTAGAAGCCCTTACTTT
TCATCAATCCATTGAAATTCATCAACTCCAAAACATTAACCGTTATATCTTGGAGCAAATTGAGGATGGATATCTGGTTT
TAGATGAAAGTAATCATATTGTTTTAACCAATCCTGCTGCCAATACATTATTAGGCATTCATTTACCTGTTTCCCATGAA
AAAACGCCCTTAATCAAATGGCAACCCGATCTATTTGAATTGATCAAATTCAGTGACCTAGAAGATGGTGAAGAGTTCAC
TTTTGAGTCACAACAAAGTTTGTATACCGTCCATGTACGTGTCAAACATTTGGTCGTACCTGAACAAGCATTAGTTTTAT
TAATTCTCAAAGATGCTCAGAAATTAACTCAGCGTGTACAACAACTTAAACTCGCAGCGCTCGGACAACTTTCTGCCAGT
ATTGCACATGAAATTCGCAATCCTTTAGCCGCGATTGTGCAAGCCAATGAGCTGTTTAATGAAAGCGATGCGCATCAACA
ACAAATGCTCACTCGTATGATTCGTAAACAAGCAAAACGTATCGATCGGATTGTAGAAGATACTTTGGCAATGGCACGCA
ATAAACCGACCGAACCACAAAATATTCATCTTATGGAGTTCTTTAAAAGTTTATTTGAAGAGGATCTAGTCGATGTCAAA
CACATGATCCAATTAGAGCTTTCAGAAAATATTCAAATCTTATTTGATGACAAACAGTTGCGCCAAGTGCTGATCAATTT
GGTGAGAAATGCATTAAGACACAACGCATCGGATATACCTTATATCGAAATTAAAGTACACGCTGAAGAGACTAAAGTTC
GAATTGATGTTATCGATTTTGGTTTAGGGGTAGCAAAAAGAGACCTTTCTCAACTGTTTAAACCATTTTTTAGTACCGAA
ATCAAAGGAACTGGTTTAGGATTGTATTTGTCTCATAGTTTCTGTGAGGCGAATCATGCAAAGCTCACGTATGTAGAGCG
ACAACAAGGAGCATGCTTCAGGATTGAATGCTCAATAATTAATTGA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-516)

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4P7BA38

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

65.243

98.848

0.645

Multiple sequence alignment