Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   GL188_RS05690 Genome accession   NZ_CP046359
Coordinates   1133916..1134380 (-) Length   154 a.a.
NCBI ID   WP_197120254.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain 573     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1128916..1139380
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GL188_RS05670 (GL188_05785) - 1129867..1130835 (-) 969 WP_000105362.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  GL188_RS05675 (GL188_05790) pdrM 1130989..1132350 (-) 1362 WP_000278539.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  GL188_RS05680 (GL188_05795) - 1132361..1132621 (-) 261 WP_001105925.1 hypothetical protein -
  GL188_RS05685 (GL188_05800) - 1132635..1133903 (-) 1269 WP_000924494.1 dihydroorotase -
  GL188_RS05690 (GL188_05805) mutX 1133916..1134380 (-) 465 WP_197120254.1 NUDIX hydrolase Machinery gene
  GL188_RS05695 (GL188_05810) - 1134390..1135043 (-) 654 WP_000401326.1 uracil-DNA glycosylase -
  GL188_RS05700 (GL188_05815) - 1135179..1135826 (-) 648 WP_075218829.1 hypothetical protein -
  GL188_RS05705 (GL188_05820) - 1135840..1136553 (-) 714 WP_050111435.1 YjjG family noncanonical pyrimidine nucleotidase -
  GL188_RS05710 (GL188_05825) - 1136962..1137180 (-) 219 Protein_1144 PTS mannose family transporter subunit IIA -
  GL188_RS11490 - 1137180..1137254 (-) 75 Protein_1145 dihydroxyacetone kinase subunit L -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17786.08 Da        Isoelectric Point: 4.2287

>NTDB_id=351232 GL188_RS05690 WP_197120254.1 1133916..1134380(-) (mutX) [Streptococcus pneumoniae strain 573]
MPQSATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAAREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGTLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=351232 GL188_RS05690 WP_197120254.1 1133916..1134380(-) (mutX) [Streptococcus pneumoniae strain 573]
ATGCCTCAGTCAGCGACGATTTGCTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGCGCGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGACGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACTTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

98.052

100

0.981

Multiple sequence alignment