Detailed information NTG0351174

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: GL186_RS10780
• Genome accession: NZ_CP046358
• Coordinates: 2105941..2107038 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266669.1
• Uniprot ID: C1CBK4
• Organism: Streptococcus pneumoniae strain 566
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2100941..2112038

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GL186_RS10755 (GL186_10950)	pgsA	2101462..2102007 (-)	546	WP_000712132.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
GL186_RS10760 (GL186_10955)	rodZ	2102018..2102839 (-)	822	WP_001227957.1	cytoskeleton protein RodZ	-
GL186_RS10765 (GL186_10960)	yfmH	2102881..2104164 (-)	1284	WP_000170215.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
GL186_RS10770 (GL186_10965)	yfmF	2104161..2105411 (-)	1251	WP_000424267.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
GL186_RS10775 (GL186_10970)	yaaA	2105570..2105938 (+)	369	WP_000455903.1	S4 domain-containing protein YaaA	-
GL186_RS10780 (GL186_10975)	recF	2105941..2107038 (+)	1098	WP_000266669.1	DNA replication/repair protein RecF	Machinery gene
GL186_RS10785 (GL186_10980)	guaB	2107089..2108567 (-)	1479	WP_000073428.1	IMP dehydrogenase	-
GL186_RS10790 (GL186_10985)	trpS	2108719..2109744 (-)	1026	WP_000165444.1	tryptophan--tRNA ligase	-
GL186_RS10795 (GL186_10990)	-	2109950..2111572 (+)	1623	WP_000958769.1	ABC-F family ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41960.00 Da
• Isoelectric Point: 8.6746

>NTDB_id=351174 GL186_RS10780 WP_000266669.1 2105941..2107038(+) (recF) [Streptococcus pneumoniae strain 566]
MWLQHLSLKTFRNYKETKIDFNPKLNVFLGRNAQGKTNMLEAIYFLALTRSHRTRTDKNLIHFDEEQLHLSGLVQKKTGS
IPLEIELTQKGRVTKVNHLKQARLSDYVGHMNVVLFAPEDLQLIKGAPSIRRKFIDMELGQIKPIYLSDLTNYNHILKQR
NTYLKSDQKIDETFLSVLDDQLVDYGCRVMNHRLDFIKKLESFGRKKHFELSNQIEELSISYQSSVNITDKQNLSESFKI
ALEKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITTESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFTIQDGKASVNGN

Nucleotide

• Length: 1098 bp

>NTDB_id=351174 GL186_RS10780 WP_000266669.1 2105941..2107038(+) (recF) [Streptococcus pneumoniae strain 566]
ATGTGGCTACAACATCTATCTCTCAAGACTTTTCGTAATTACAAAGAAACGAAAATAGACTTTAATCCTAAATTGAATGT
CTTTTTGGGACGTAATGCACAAGGAAAAACAAACATGTTAGAGGCTATCTATTTTTTAGCCTTAACGCGTAGTCATCGAA
CTCGAACAGATAAAAATCTCATTCATTTTGATGAGGAACAACTTCATCTTTCAGGTCTCGTTCAGAAAAAAACTGGATCC
ATTCCCCTAGAAATCGAACTAACACAAAAAGGCCGTGTAACAAAAGTTAATCACTTAAAACAGGCACGCCTTTCAGATTA
TGTAGGACACATGAATGTTGTCTTATTTGCTCCTGAAGATTTACAACTAATTAAAGGAGCACCTTCGATTCGACGAAAAT
TCATTGATATGGAACTTGGGCAAATTAAGCCAATCTACTTATCTGACTTAACCAATTATAACCACATCCTAAAGCAAAGA
AACACTTACCTAAAATCAGATCAAAAAATAGATGAAACATTCCTTTCTGTGTTAGATGATCAGCTAGTTGATTATGGATG
TCGTGTAATGAATCACCGCTTAGATTTCATAAAAAAACTAGAATCATTTGGGCGTAAGAAACATTTTGAACTCTCTAATC
AGATCGAAGAGTTGTCAATATCCTATCAATCTTCTGTCAATATAACTGACAAACAAAACTTATCCGAATCTTTCAAAATT
GCTTTAGAAAAAAGTAGATCCAGAGATTTATTTAAAAAGAATACTGGTGTCGGTCCTCATCGAGATGACATTTCTTTTTA
TATAAATGGGATGGATGCTAGTTTCGGAAGCCAAGGTCAACATCGTAGTCTCGTCCTCTCGATAAAATTAGCAGAAATCG
AATTAATGGAAAGCATTACCACAGAATCTCCGATATTACTGCTTGACGATGTGATGAGTGAACTTGACAACACTAGACAG
TTAAAATTATTAGAAACGATTTCTCAATCAATCCAAACCTTTATCACAACAACAAGCTTAGACCATCTTCAAAATCTGCC
AGAAAATCTAAGTATCTTCACTATTCAGGATGGTAAAGCTTCTGTAAATGGAAATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-358)

3D structure

• AlphaFold DB: C1CBK4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	99.726	100	0.997
recF	Bacillus subtilis subsp. subtilis str. 168	45.902	100	0.46